Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31278g00001 ATGCAGCCTGATATAGCAGCTCCTGGAGTTAACATATTGGCATCTTATACACTAAGGAAATCAATAACTGGTTTGAAAGGGGATACTCAATTTTCAGAATTCACTCTAATGTCAGGAACATCCATGTCATGCCCTCATGTTGCTGGAGTAGCAGCATATGTCAAGTCTTTTCACCCAGATTGGACTCCAGCTGCTATCAGATCTGCCATTATAACCACAGCTAAACCTATGAGCAAGAGAGTTGACAAGGAGGCCGAATTAGCCTTTGGCGCTGGTCAAGTAAACCCGACGAAAGCTGTGAATCCCGGTCTAGTCTACGACATGGACGACCTCGGTTATATCCAGTTCCTATGCCATGAGGGCTACAATGGTTCTGCTTTATCAGTACTAGTAGGACACCCTATAAATTGCACCTCTTTGGTACCAGGACTTGGCCATGATGCTATCAACTACCCTACAATACAATTCAATGTGAAAAAAGACAAAGAAACAACCCTTGGTGTTTTTAGGAGAAGAGTTACCAATGTTGGTTCTGCTCCTACAATCTTCAATGCTACCATTACAGCTCCTAAGGGAGTGGAAATTACAGTTAAGCCAACTAGCCTTGTTTTCTCAAAGACTATGCAGACAAGGAGCTTCAAGGTTGTGGTGAAAGCAAAAACAATGCCAAGTATGAATGTTGTGTCTGGTTCTCTTGTTTGGAGAAGTCCACGTTACATTGTTAGGAGCCCCATTGTTGTCTATAGTCCTTAA 753 0.4276 MQPDIAAPGVNILASYTLRKSITGLKGDTQFSEFTLMSGTSMSCPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSKRVDKEAELAFGAGQVNPTKAVNPGLVYDMDDLGYIQFLCHEGYNGSALSVLVGHPINCTSLVPGLGHDAINYPTIQFNVKKDKETTLGVFRRRVTNVGSAPTIFNATITAPKGVEITVKPTSLVFSKTMQTRSFKVVVKAKTMPSMNVVSGSLVWRSPRYIVRSPIVVYSP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31278g00001 250 Pfam Fibronectin type-III domain 149 247 IPR041469 -
Stsc31278g00001 250 Gene3D - 117 249 - -
Stsc31278g00001 250 ProSitePatterns Serine proteases, subtilase family, serine active site. 39 49 IPR023828 -
Stsc31278g00001 250 SUPERFAMILY Subtilisin-like 3 104 IPR036852 GO:0004252|GO:0006508
Stsc31278g00001 250 Gene3D Peptidase S8/S53 domain 1 110 IPR036852 GO:0004252|GO:0006508
Stsc31278g00001 250 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 247 IPR045051 -
Stsc31278g00001 250 ProSiteProfiles Serine proteases, subtilase domain profile. 1 100 - -
Stsc31278g00001 250 Pfam Subtilase family 2 92 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31278g00001 Stsc-Chr31278 3688 4717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31278g00001 1 249 Subtilisin-like Serine Gene Family AT5G59100 41.107 2.07e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31278g00001 - - ccaj:109800351 423.705