Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc311g00010 ATGCTGCTAGAACTTGCTAGAAGAGAAAAGAATGCTGGAATAAAACCAGATGTTGATCTTGATATCTTCATGAAGGCAATTGCTCTTGGAGGACAGGAAACAGATCTTGTGGTAGAGTACATCATAAAGATATTAGGTTTGGACATTTGTGGAGACACATTGGTGGGAGATGAAATGCTCAAGGGCATCTCAGGGGGACAAAAGAAGCGACTTACAACAGGAGAGTTGCTAATTGGTCCAGCAAGAGTTCTGTACATGGACGAGATATCAACTGGCCTCGATAGTGCAACCACATACCAAATCATTAGATATCTTAAACATTCTACCCGTGCACTTGATGCAACCACTATCATATCTCTTCTTCAACCAGCTCCCGAGACCTATGAATTGTTTGATGATATCATTCTATTGTGTGAGGGTCAGATTGTTTATCAAGGGCCCCGTGAATCTGCTCTTGAGTTTTTCAAAATGATGGGCTTCACTTGCCCTGAACGTAAGAATGTAGCAGATTTCTTACAAGAAGTTACGTCGAAGAAGGACCAGGAGCAGTATTGGTCTGTTCTCGACCAGCCTTATCGGTACATACCTGTTGGGAAGTTTGCAGAAGCGTTTTTATTGTATCGCGAGGGAAAGAATTTGTCAGAGGAACTAAGGGCTCCATTTGATAAACGCTACAATCATCCCGCAGCCTTGGCTACTTGTACCTATGGCGCCACGAGGCTTGACCTTCTCAGGACAAATTACCAGTGGCAGAAGCTTCTTATGAAACGGAATTCATTCATTTATGTTTTCAAATTCGTTCAGCTGTTTTTGGTTTGTTTAATTACAATGAGTGTATTTTTCCGGACAACGATGCATCATAATACAATTGACGACGGGGGATTATATCTTGGTTCACTGTACTTTTCTATGGTTATTATTCTCTTCAATGGTTTTACGGAGGTGTCCATGTTAGTTGCAAAGCTTCCAGTTTTGTACAAGCATAGAGACTTGCACTTCTATCCTAGCTGGGCATATACAATCCCTTCTTGGTTCCTTAGCCTCCCGACTTCTCTCATGGAAGCTGGTTGCTGGGTTGCTGTATCTTACTATACAATTGGATATGACCCTTCAATTATGAGATTTTTTCGGCAACTCTTGCTTTATTTCTTTCTTCACCAGATGTCTATAGGCCTATTTCGTCTGATAGGATCCTTGGGGCGGAACATGATAGTGGCCAACACTTTTGGATCCTTTGCCATGTTGATTGTGATGGCTCTTGGCGGATACATCATTTCAAGAGATCGCATTCCGAGTTGGTGGATATGGGGTTTTTGGATTTCTCCTTTGATGTATGCACAAAACTCAGCTTCCGTAAATGAGTTCCTTGGGCATTCCTGGGATAAGACAGTACAAAATCAGATTACCAGCTATCCCTTGGGTAAGGCAGTATTGAAACAGCGAAGTTTGTATCAAGAGAGCTATTGGTATTGGATTGGTCTTGGAGCAATGGTTGGATATACAATTTTGTTCAACACGTTATTTACTATCTTCTTAGCTTACCTTAATCCTTTGGGAAAACAACAAGCTGTAGTTTCAAAGAGTGAGCTACAAGAAAGAGAAAAGAGAAGGAAAGGTGAAAGTGTCATTGTTGAGTTGAGAGAGTACTTGCAGCATTCAGCATCCAGTGGAAAGCATTTTAAGCAAAGAGGAATGGTTCTCCCATTTCAACCTCTTTCCATGGCTTTCAGCAATATCAATTACTATGTGGATGTCCCTTTGGAATTGAAACAACAAGGGATATTAGAAGAAAGGCTGCAGTTGCTTGTTAATGTTACTGGAGCTTTTAGGCCTGGAGTGTTGACAGCATTGGTTGGAGTAAGTGGGGCTGGAAAAACCACGCTAATGGATGTCTTGGCTGGAAGAAAAACTGGTGGTGTTATAGAAGGGAACATATACATATCTGGTTATCCCAAAAGCCAAGACAGTTTTGCAAGAATTTCTGGTTATTGTGAGCAGACTGATGTTCATTCCCCTTGCTTGACTGTCTGGGAGTCTTTATTGTTCTCTGCTTGGCTCCGGTTATCTTCAGATGTTAACTTTGAAACGCAAAAGGCCTTCGTTGAGGAGGTAATGGAGCTGGTGGAGCTCACTCCATTGAAAGGAGCACTAGTTGGTCTACCTGGAATTGATGGTTTGTCAACAGAACAACGAAAAAGATTAACAATAGCAGTTGAACTGGTTGCAAACCCATCTATAGTTTTCATGGATGAGCCCACTTCAGGGTTGGATGCCAGGGCTGCAGCCATTGTAATGAGAACTGTTAGGAATATAGTGAATACTGGCCGAACAATCGTGTGCACAATTCATCAACCTAGTATAGACATATTTGAATCGTTTGATGAGCTTCTGTTTATGAAGCGTGGAGGAGAGCTCATATATGCTGGTCCACTTGGCCCTAAATCTAGTGAGCTTATCAATTATTTCGAGGCAGTGGATGGGGTTCCGAAGATCAGGTCCGGATATAACCCTGCAACATGGATGTTGGAGGTTACTTCTTCAACAGAAGAAAACCGTTTGGGAGTGGACTTTGCAGAAATATACCGAAGATCAAGTTTATACCAGTATAACAAAGAATTGGTTGAAAGCTTGAGCAAGCCGAGCAATAATTCAAAAGATTTGCATTTTCCAACCAAGTATTGTCGGTCATATTTTGATCAGTTCCTAACTTGTCTTTGGAAGCAAAATCTATCTTACTGGCGTAACCCGCACTACACTGCTGTTCGCTTCTTTTACACTGTCATCATCTCCTTGATGCTGGGGACAATATGCTGGAGATTTGCCGTTCAACCGGTTGTTTCGGTTGAAAGATTTGTTTCATATAGAGAAAGAGCTGCAGGGATGTATTCGGCATTACCATTTGCTTTTGCTCAGGTTATTATTGAGTTTCCTTATGTGTTTGCACAGGCTATGATATACTCCACAATATTCTATTCTATGGCTTCCTTTGTCTGGAGTGTTGATAGGTTCATATGGTACTTGTTCTTCATGTATGTTACTATGTTGTATTTTACCTTCTATGGAATGATGACAACGGCTGTCACACCAAATCATAATGTTGCTGCCATCATCGCTGCTCCATTTTATATGTTGTGGAACCTTTTCAGTGGTTTTATGATTCCTCATAAGAGAATCCCTGTTTGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGAGTCTTTATGGTCTCCTGACTTCACAATATGGGGGTGATGAAAAACCTGTGAAACTGTCTAATGGGAATTCCATGGCTATCTCGCAAGTACTCAGAGTGGTGTTTGGGTACAGGCATGATTTCTTGTGCGTTGCTGCTATTATGGTTGCTGGCTTCTGCGTATTTTTTGCAATAATATTTGCCTTTGCAATTAAATCCTTCAATTTCCAAAGGAGATGA 3438 0.4145 MLLELARREKNAGIKPDVDLDIFMKAIALGGQETDLVVEYIIKILGLDICGDTLVGDEMLKGISGGQKKRLTTGELLIGPARVLYMDEISTGLDSATTYQIIRYLKHSTRALDATTIISLLQPAPETYELFDDIILLCEGQIVYQGPRESALEFFKMMGFTCPERKNVADFLQEVTSKKDQEQYWSVLDQPYRYIPVGKFAEAFLLYREGKNLSEELRAPFDKRYNHPAALATCTYGATRLDLLRTNYQWQKLLMKRNSFIYVFKFVQLFLVCLITMSVFFRTTMHHNTIDDGGLYLGSLYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWAYTIPSWFLSLPTSLMEAGCWVAVSYYTIGYDPSIMRFFRQLLLYFFLHQMSIGLFRLIGSLGRNMIVANTFGSFAMLIVMALGGYIISRDRIPSWWIWGFWISPLMYAQNSASVNEFLGHSWDKTVQNQITSYPLGKAVLKQRSLYQESYWYWIGLGAMVGYTILFNTLFTIFLAYLNPLGKQQAVVSKSELQEREKRRKGESVIVELREYLQHSASSGKHFKQRGMVLPFQPLSMAFSNINYYVDVPLELKQQGILEERLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGVIEGNIYISGYPKSQDSFARISGYCEQTDVHSPCLTVWESLLFSAWLRLSSDVNFETQKAFVEEVMELVELTPLKGALVGLPGIDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGPKSSELINYFEAVDGVPKIRSGYNPATWMLEVTSSTEENRLGVDFAEIYRRSSLYQYNKELVESLSKPSNNSKDLHFPTKYCRSYFDQFLTCLWKQNLSYWRNPHYTAVRFFYTVIISLMLGTICWRFAVQPVVSVERFVSYRERAAGMYSALPFAFAQVIIEFPYVFAQAMIYSTIFYSMASFVWSVDRFIWYLFFMYVTMLYFTFYGMMTTAVTPNHNVAAIIAAPFYMLWNLFSGFMIPHKRIPVWWRWYYWANPVAWSLYGLLTSQYGGDEKPVKLSNGNSMAISQVLRVVFGYRHDFLCVAAIMVAGFCVFFAIIFAFAIKSFNFQRR 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc311g00010 1145 Gene3D - 10 190 IPR027417 -
Stsc311g00010 1145 FunFam ABC transporter G family member 34 1 198 - -
Stsc311g00010 1145 Gene3D - 588 818 IPR027417 -
Stsc311g00010 1145 Pfam ABC transporter 603 754 IPR003439 GO:0005524
Stsc311g00010 1145 Pfam ABC-2 type transporter 941 1082 IPR013525 GO:0016020|GO:0140359
Stsc311g00010 1145 Pfam ABC-2 type transporter 246 455 IPR013525 GO:0016020|GO:0140359
Stsc311g00010 1145 CDD ABCG_PDR_domain2 571 809 IPR034003 -
Stsc311g00010 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 810 IPR027417 -
Stsc311g00010 1145 FunFam ABC transporter G family member 34 588 820 - -
Stsc311g00010 1145 SMART AAA_5 611 803 IPR003593 GO:0016887
Stsc311g00010 1145 Pfam Plant PDR ABC transporter associated 460 525 IPR013581 -
Stsc311g00010 1145 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 574 827 IPR003439 GO:0005524
Stsc311g00010 1145 Pfam ABC-2 type transporter 122 175 IPR043926 GO:0140359
Stsc311g00010 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 179 IPR027417 -
Stsc311g00010 1145 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 941 1145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc311g00010 Stsc-Chr311 46274 52022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc311g00010 599 786 Calmodulin-binding Proteins AT2G36910 25.000 7.52e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc311g00010 K08711 - gmx:100815410 2088.54