Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31190g00003 ATGGAGTTAAAATACAGAGAAAGCGTGAAACCAAGTTCAGCAACTCCTCCACACCTCAAAACTTATCCCCTCTCCTTCCTGGATGTGACAAGTCATTCCCAATACATGCCAATGCTTTACTTTTACAATACAAAACAAATTGAAAACCAAGAATCAAAGTTAGCCCTGCTCAAAAAATCCTTAGAGGAAGCGCTCTCAGCGTACTACCCAATTGCAGGCAGGTTCAAAGGTCGACTCGCCATTGACTGCAATGACGAAGGAGTGCCATTACTCATCACAAAACTCAAATGCCATCTTTCACACTTCCTCAAGAACCCAATCACACCTAACCTTCTTCCTCTCTTCCCGGACAATCTTGCATGGAGTGATATGAATGATCCAGACCATGATCCCATTATGGCCATTCAAATCAACTGCTTCCAATGCGGCGGAATCGCAATCGCAATCTGTCTCTCTCACAAGTTCGGCGACATTTCCACTCTCTTCAACTTCGTCAGCCACTGGGCCGCCATCACCACCCACCACCAAGATCAGAACAAGCCACTACCTTCTCCGCCCTTACTCGACGCCGGAGTTTCGATTTTTCCTCAAGGAAACATTCCGGTTTACCGCGGAATCCCCTACTACGCTATCCCGAAATTTGTCTGTAAGAGGTTTGTGTTCGAAGCTTCCAAGATCGAAGCCCTCAAAGCCATGGCTGGACCAATTCATCCCACAAGATTTCAAGCGGTGGCGGCACTGATTTATAAGTGTGCGGTTTCTGCACTAAACCCTAACTCCCCGTTGCTAACCTCCATTGCCGTGAATCTCCGGAACAGGATCGATCCTCCTGTTCCTAGCAACACCTTAGGGAACATGGTTACGGCCTTGATAATTGCGATCTCTCAGGAGGATCAGCTAGCGGAGTTGGTAAGCAAGATAAAAGAGGGGATAATTCAAAGTGAGATGCAGTGGAAGAAGCTTGGAGGAAAGTACAGGGACTTGGATTTCATAACTGATCGACTGAAACAAATGTCGGAGGCTCCGCCGACGCTGGAGGCTTTGAAGATTCCGTTGATGGCACTGACTAGTTGGTGCGGGTTTTCAATGTACGAGACGGATTTTGGATGGGGGAAACCGGCATGGATAGCGTCCTTTACGAATCAGTATAACACTGTGATTTTTATGGATGCCAGAGATGGAAAAGGGATGGAAGTGATGGTGAGCATGGAAGAGGAGAACATGGCAAGGTTTCAGTGCAACCGGGAACTGCTTCAATATGCCTTTCTTGACCCATCCGTTATACTCTGA 1290 0.4721 MELKYRESVKPSSATPPHLKTYPLSFLDVTSHSQYMPMLYFYNTKQIENQESKLALLKKSLEEALSAYYPIAGRFKGRLAIDCNDEGVPLLITKLKCHLSHFLKNPITPNLLPLFPDNLAWSDMNDPDHDPIMAIQINCFQCGGIAIAICLSHKFGDISTLFNFVSHWAAITTHHQDQNKPLPSPPLLDAGVSIFPQGNIPVYRGIPYYAIPKFVCKRFVFEASKIEALKAMAGPIHPTRFQAVAALIYKCAVSALNPNSPLLTSIAVNLRNRIDPPVPSNTLGNMVTALIIAISQEDQLAELVSKIKEGIIQSEMQWKKLGGKYRDLDFITDRLKQMSEAPPTLEALKIPLMALTSWCGFSMYETDFGWGKPAWIASFTNQYNTVIFMDARDGKGMEVMVSMEEENMARFQCNRELLQYAFLDPSVIL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31190g00003 429 Gene3D - 212 420 IPR023213 -
Stsc31190g00003 429 PANTHER F21J9.9 6 421 - -
Stsc31190g00003 429 Gene3D - 1 201 IPR023213 -
Stsc31190g00003 429 Pfam Transferase family 2 417 - -
Stsc31190g00003 429 Coils Coil 47 67 - -
Stsc31190g00003 429 SUPERFAMILY CoA-dependent acyltransferases 217 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31190g00003 Stsc-Chr31190 16491 17867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31190g00003 1 412 Monolignol Biosynthesis Gene Families AT5G48930 23.568 1.49e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31190g00003 - - adu:107481923 646.736