Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31168g00004 ATGGGGAGTTCCAATATTCACTACCTTCGCATTATTGTTTTATCATTTCTTCTCTTCATCTTCTTGCTGCCAGAAGCTGTCCACGGCAGCAAAAAGTGCTACATTGTGTATTTGGGAGCACATTCTCATGGCCCAAGACCTACCTCTTTTGACATGGAAGCCGCCACATCTTCTCATTATGATTTGCTAAGTTCTGTTCTGGGAAGCCATGAGAAAGCGGAAAAGGCAATGATATACTCCTACAATAAGCACATCAATGGCTTTGCTGCGATGCTTGAAGAGGAAGAAGCAGCTCAAATAGCAAAAAAGCCGAATGTGGTGTCGGTGTTCTTGAGCAAAGAGCGCAAACCTCAAACAACAAGATCATGGGAATTTCTTGGACTAAGAACAAATGCGAAGAACACAGCATGGCAAAAGGGTAGATATGGTGAAAATACAATCATCGCCAATATTGACACAGGGGTTTGGCCGGAGTCGAAAAGCTTCCGGGACGGAGGATATGGCCCCATCCCTTCCAAATGGCGCGGCGGTAATGTCTGTCAACTAGATAGAGTTCCTACTTCCGCCAAAAATCTTTGCAACAGGAAGCTTATTGGAGCAAGATTTTTCAGCAAAAATTTTGAGGCAAGTAACGGAATGGTAAAGTCAGAGGAGCGTACAGCGCGTGACTTACAGGGGCATGGGACCCACACTCTATCAACCGCGGGGGGAGATTTTGTGCCAGGAGCACATGTGTTTGCAGTTGGTAACGGCACCGCAAAGGGTGGGTCCCCCAAGGCCAGGCTTGTAGCGTACAAGGTGTGTTGGTCAAGAATAGACGAAAACAGTTGCCACGAAGGTGATATAATTGATGCAGTTGACCATGCCATCAACGACGGCGTTGATATCATCAATCTCTCTGTTGGTGGCCGACGGGGCGTCACCTCTTATGATATATTCACCGATGGGGTGTCCTTAGCGGCTTTCCATGCAATGTCTAACAACGTTCTTTGCGTTGCATCTGCTGGCAATGATGGACCTGATCCCGGCACTGTTTCCAATGGGGCTCCTTGGATATTCACTATTGGTGCAAGCACCATTGACAGAGACTTCACCAGTACCCTTACTTTCAGTGACGGAACCAAAATCATAGTACATATGCATCATCATCATCTACTTGTTATTTATACATGCTTTCCCAATTAA 1185 0.4624 MGSSNIHYLRIIVLSFLLFIFLLPEAVHGSKKCYIVYLGAHSHGPRPTSFDMEAATSSHYDLLSSVLGSHEKAEKAMIYSYNKHINGFAAMLEEEEAAQIAKKPNVVSVFLSKERKPQTTRSWEFLGLRTNAKNTAWQKGRYGENTIIANIDTGVWPESKSFRDGGYGPIPSKWRGGNVCQLDRVPTSAKNLCNRKLIGARFFSKNFEASNGMVKSEERTARDLQGHGTHTLSTAGGDFVPGAHVFAVGNGTAKGGSPKARLVAYKVCWSRIDENSCHEGDIIDAVDHAINDGVDIINLSVGGRRGVTSYDIFTDGVSLAAFHAMSNNVLCVASAGNDGPDPGTVSNGAPWIFTIGASTIDRDFTSTLTFSDGTKIIVHMHHHHLLVIYTCFPN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31168g00004 394 Gene3D Peptidase S8/S53 domain 146 360 IPR036852 GO:0004252|GO:0006508
Stsc31168g00004 394 Pfam Peptidase inhibitor I9 34 116 IPR010259 -
Stsc31168g00004 394 Gene3D - 361 376 - -
Stsc31168g00004 394 FunFam Subtilisin-like protease SBT5.3 24 118 - -
Stsc31168g00004 394 ProSiteProfiles Serine proteases, subtilase domain profile. 122 394 - -
Stsc31168g00004 394 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 375 IPR045051 -
Stsc31168g00004 394 CDD Peptidases_S8_3 116 360 IPR034197 -
Stsc31168g00004 394 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Stsc31168g00004 394 Pfam Subtilase family 143 361 IPR000209 GO:0006508|GO:0008236
Stsc31168g00004 394 SUPERFAMILY Subtilisin-like 118 374 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31168g00004 Stsc-Chr31168 17623 21927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31168g00004 31 373 Subtilisin-like Serine Gene Family AT5G59810 53.890 1.40e-123 373