Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31166g00003 ATGACTGCGGATCCTGAAGCCGAGAATGCAAATGAACAAACACACGAGTTTACGTGTGATGTCGAGGAGGAGTATATTCTGAAGGCTGGAATGACATTTAAAACACTTTCTGAGGTTGGTTTGTTCTACAAAGAGTATGCAAAACGTGCAGGGTTCTCTACTAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATCAATCAACTCATAACATGTAACAGACAAGGACAATGGACATTTGAGGTACCTTACGTTGAGAAGACAAAGCCTATCTGTGGTGCAAACTGTCCCGCACGAATTTATGCTCAC 318 0.4057 MTADPEAENANEQTHEFTCDVEEEYILKAGMTFKTLSEVGLFYKEYAKRAGFSTKIRNTNRCKETKEEINQLITCNRQGQWTFEVPYVEKTKPICGANCPARIYAH 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31166g00003 106 Pfam FAR1 DNA-binding domain 42 104 IPR004330 -
Stsc31166g00003 106 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31166g00003 Stsc-Chr31166 22394 22897 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc31166g00003 FAR1 1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31166g00003 - - adu:110280446 101.679