Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31127g00001 ATTTTCTTTCTTCGACGAAACCCACCACCACCCTCTCCTCGTCACCCTCCGACACGATCCCGCCGCACCGCCGCGTCTGAGCCCGTCCACATCTCATCCCACCAACGTTGTCGGCACCGTCGAAGCATTGCATCGAAGTCCCTAGTCGCCGTCTTGAAGGTAGAAGAAGTCTCAGCCGCTGTCGTCTCAGCGCCGCGACCCAGCCACCCCCCATCTCATCCCGTCGCCGTCGACCTTGCAGGAGCGCCGTCGCACTGTCGTCGCCTCGGAAGTGTCAGCATTCAGCGCCGCCGTATCCTAGTCCTCGGTCGCCATCTTCAAGCTCGAAGAAGTCTTCAATCCTTCGTGTTCGTATTCCATCTCCGTCTTCAAGTCTTTGTCTCAGCCGTCCATGGTCTTCAGCTTTCTGCCTTGAAGATTGACTTCACTAATCTTGCTTCATTCAAACATGCAGAGTTTTCAGTAGGGAAGGCACTTAAATGGTCTAATAGACTTGCAATTCTAATTGGAGTTGCTAAAGCTGTGCATTTCCTACACACTGGTGTCATCCCTGATTGTTTTGAAAACCAGCTAAAGACAAGGAATATTTTGCTTGATGAGCATCGCATTCCGAAATTAAGCGACTACGGAATTGCCATCATTAGAGAAGAAATAGACAAGCATGAGGTACCTTTGCTGTGA 681 0.511 IFFLRRNPPPPSPRHPPTRSRRTAASEPVHISSHQRCRHRRSIASKSLVAVLKVEEVSAAVVSAPRPSHPPSHPVAVDLAGAPSHCRRLGSVSIQRRRILVLGRHLQARRSLQSFVFVFHLRLQVFVSAVHGLQLSALKIDFTNLASFKHAEFSVGKALKWSNRLAILIGVAKAVHFLHTGVIPDCFENQLKTRNILLDEHRIPKLSDYGIAIIREEIDKHEVPLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31127g00001 226 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31127g00001 226 MobiDBLite consensus disorder prediction 1 36 - -
Stsc31127g00001 226 Gene3D Transferase(Phosphotransferase) domain 1 143 224 - -
Stsc31127g00001 226 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 147 217 - -
Stsc31127g00001 226 MobiDBLite consensus disorder prediction 1 17 - -
Stsc31127g00001 226 SUPERFAMILY Protein kinase-like (PK-like) 141 218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31127g00001 Stsc-Chr31127 1668 3111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31127g00001 157 222 Miscellaneous Gene Families AT5G14210 69.697 3.10e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc31127g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31127g00001 - - gmx:100780663 126.331