Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31105g00003 ATGGCCTCTTGTGAAAGTAGTGGTGACATGATGAATGTAGGAGCTTCGGATTTTGATCCTAACGATGGTAACAAGAAAAGGAAGCAATCATGCAACTGCGAAAAGAGTCAATGCTTGCAACTATACTGTGAATGCTTTAGTTCTGGAAACTTTTGCAACGACTCTTGCTCTTGCAAAACGTGCATGAATAATGAGGAGAACAATGTGTTTACGAGAAGAAGGAAATTGAATCGCGGGATCCACACGCGTTTCGATCCAAGATTATTCATGCCGAGAACGAGTCAGCAAGGCATAGAAAAGGTTGCTGTTGCAACAAGTTGCAAGCATGTTCATGGAAGCAACAAAGAAGAACAAGAACAAGAAGAAGGTGTTTTATCTAATAATAATAACAATAATGACAGCAACAATGGAATGGTAAATAACGGATCATCTTCTCAATCTCATCATCCAGCTGCCAACAATGATAACTTCTTACCTCACTAG 483 0.3975 MASCESSGDMMNVGASDFDPNDGNKKRKQSCNCEKSQCLQLYCECFSSGNFCNDSCSCKTCMNNEENNVFTRRRKLNRGIHTRFDPRLFMPRTSQQGIEKVAVATSCKHVHGSNKEEQEQEEGVLSNNNNNNDSNNGMVNNGSSSQSHHPAANNDNFLPH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31105g00003 160 MobiDBLite consensus disorder prediction 110 160 - -
Stsc31105g00003 160 PANTHER TESMIN/TSO1-RELATED 13 112 IPR028307 -
Stsc31105g00003 160 MobiDBLite consensus disorder prediction 1 22 - -
Stsc31105g00003 160 SMART CXC_2 26 67 IPR033467 -
Stsc31105g00003 160 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 29 65 IPR005172 -
Stsc31105g00003 160 MobiDBLite consensus disorder prediction 123 160 - -
Stsc31105g00003 160 ProSiteProfiles CRC domain profile. 1 66 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31105g00003 Stsc-Chr31105 15904 16460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31105g00003 22 94 CPP Transcription Factor Family AT2G20110 42.466 4.77e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Stsc31105g00003 TCR 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31105g00003 - K21776 ahf:112771246 82.4185