Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31087g00001 ATGGAGATCGACAACAAGTGCGGTTGCTGGTCTCTCCTCAAACGCGGCGTTACAGGTTCCTGCAAATCTTCTTCTGCTTCCAGACACTCCCCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACTGAGACAAGGTACCTGAATGCTAGCAATAGAGAACTATGTGCTCCCAATGAAGCTAGAGTGTCTTCTGAAAATCCTGATCCCCCACCTCAGGAGAATAAGCCTCCTTCCCCACTTCTTAAATTCACATTTCAAGAACTTAAAGCTGCCACTGGAAATTTCAGACCTGATAGTATTCTTGGGGAGGGTGGTTTTGGTTATGTTTTCAAGGGATGGATTGAGGAAGACGGAACCGCCCCGGCGAAACCTGGCTCGGGGGTTACCGTGGCTGTCAAAAACTTGAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTACCTTTCTCGGACAGCTTCACCATCCTAACCTTGTGAAACTTATTGGCTACTGTATTGAAGATGACCAGAGGCTTCTTGTGTATGAGTTTATGACCCGGGGAAGTCTAGAGAATCATCTATTCAGAAGAACTGTACCTCTTCCATGGTCCAACAGGGTTAAGATTGCACTTGGTGCTGCAAAAGGACTGGCCTTCCTCCATAATGGTCCCGAACCAGTCATTTATAGAGATTTTAAGACATCAAACATTTTGCTTGATACGGAGTATAATGCGAAGCTTTCGGATTTTGGTCTAGCCAAAGCAGGGCCTCAAGGAGACAAGACACATGTTTCTACCAGAGTTGTTGGAACATATGGCTATGCTGCTCCGGAATATGTCATGACAGGGCACTTGACAGCGAAAAGTGATGTTTATAGCTTTGGGGTTGTATTACTTGAGATCTTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCGAGCGGGGAACAAAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAGCTATACCAACTGGTGGATCCTCGCTTGGAATTAAATTACTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCCTACAGTTGCCTCAGTAGAGATCCGAAATGCCGTCCCAACATGGACGAAGTGGTGAAGGCTCTGATGCCACTGCAAGATCTCAATGACCTTGCAATCTTGTCATATCACTCTCGTATATCCCAGCAAGGGCGGCGGAAAAAGAAGTCGGACGGAACTCCACATCTCACCTACACACAGTCCAAGAGCATCAGGGCTTCTCCCTTGAATTCCAGCAAGCAGCATCGATGA 1296 0.466 MEIDNKCGCWSLLKRGVTGSCKSSSASRHSPNTIPRTSLVYDAATETRYLNASNRELCAPNEARVSSENPDPPPQENKPPSPLLKFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKNLKPDGLQGHREWVAEVTFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKALMPLQDLNDLAILSYHSRISQQGRRKKKSDGTPHLTYTQSKSIRASPLNSSKQHR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31087g00001 431 ProSiteProfiles Protein kinase domain profile. 98 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc31087g00001 431 MobiDBLite consensus disorder prediction 62 81 - -
Stsc31087g00001 431 Gene3D Phosphorylase Kinase; domain 1 64 183 - -
Stsc31087g00001 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Stsc31087g00001 431 SUPERFAMILY Protein kinase-like (PK-like) 79 381 IPR011009 -
Stsc31087g00001 431 Pfam Protein tyrosine and serine/threonine kinase 102 377 IPR001245 GO:0004672|GO:0006468
Stsc31087g00001 431 ProSitePatterns Protein kinases ATP-binding region signature. 104 136 IPR017441 GO:0005524
Stsc31087g00001 431 CDD STKc_IRAK 104 380 - -
Stsc31087g00001 431 MobiDBLite consensus disorder prediction 397 431 - -
Stsc31087g00001 431 MobiDBLite consensus disorder prediction 409 431 - -
Stsc31087g00001 431 Gene3D Transferase(Phosphotransferase) domain 1 184 396 - -
Stsc31087g00001 431 FunFam Probable serine/threonine-protein kinase PBL8 184 397 - -
Stsc31087g00001 431 PANTHER OS01G0588500 PROTEIN-RELATED 61 381 - -
Stsc31087g00001 431 FunFam Serine/threonine-protein kinase BIK1 66 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31087g00001 Stsc-Chr31087 2086 4922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31087g00001 86 377 Glycoside Hydrolase AT3G07070 55.743 1.78e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc31087g00001 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31087g00001 - - aprc:113848012 795.808