Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31080g00003 ATGATGATTGCAACGGTGGACAATCCATCAAATGCATTTGAATGGGGACTCGCCGAGATGATAAATCAGCCGGAGATACTGCAAAAGGCGACGGAGGAAATAGATAGCGTGGTAGGTAAGGAAAGACAAGTTCAAGAATCAGACATTTCAAAACTCAATTATGTGAAAGCATGTGCAAAAGAAGTGTTTCGCCTTCACCCCATTGATGACATCAACGCTACCCATGTTGCCATGGAGGACACATTTATTGCGAACAACACCTACTTCATTCCAAAAGGTAGTCACATGGTTCTAAGGCGCCAAGGAATCGGAAAAAATCCAAGAATATGGGAAGAATCGTTGAAGTTTAAACCCGAACGTCATATACAAAAAGATAACGACGGGTTTAAGAACATAAATTTAAATGAACCGAGTTTAAATTTGATCACGTTCAGCACTGGAAGACGTGCATGTCCTGGAATCATGCTTGGGTCTACAATGACAATTATGTTGTTTGCTAGGATGCTGCATGGGTTCAATTGGAGTGTGCCACCAAATAAGACATCCATTGATCTCTCGGAATCAGAAGGAGGTACCATAAAAGCAAAGCCACTTGTGGCACTTGCAACCCCTCGGTTACCAGCGGAGGTGTATTATTGA 639 0.4241 MMIATVDNPSNAFEWGLAEMINQPEILQKATEEIDSVVGKERQVQESDISKLNYVKACAKEVFRLHPIDDINATHVAMEDTFIANNTYFIPKGSHMVLRRQGIGKNPRIWEESLKFKPERHIQKDNDGFKNINLNEPSLNLITFSTGRRACPGIMLGSTMTIMLFARMLHGFNWSVPPNKTSIDLSESEGGTIKAKPLVALATPRLPAEVYY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31080g00003 212 Gene3D Cytochrome P450 1 207 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 PRINTS E-class P450 group I signature 151 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 PRINTS E-class P450 group I signature 141 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 PRINTS E-class P450 group I signature 99 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 SUPERFAMILY Cytochrome P450 1 205 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 Pfam Cytochrome P450 1 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00003 212 PANTHER CYTOCHROME P450 98A9 1 211 - -
Stsc31080g00003 212 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 144 153 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31080g00003 Stsc-Chr31080 4468 5323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31080g00003 1 211 Cytochrome P450 AT5G05260 55.924 3.59e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31080g00003 - - adu:107486438 382.874