Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31080g00002 ATGATAGCAAACAGGCCAACATCTAGATGGATACATAAGATCATGACTGACCTAAAAACCGAAATCGCATGCATTCAGCTAGGTAACATTCATGTCATTCCAATCACTAGTCCTGAAATTGCTCGCGAAATATTGATAAAACAAGATTCAATTTTTGCATCGAGGCCTGCAAATTGGTCTAGCGAATATGTCTCAAGCGGGTACTTGAGTACAATACTAGTGCCCTATGGAGAACAATGGAAGAAAATGAAAAAAGTGATGGCGAATGAATTGGTGTCTCCAAGAAGACTTCAGTGGCTACAAGACAAGAGGGTGGAGGAAGCCGACAACATTGTTAGCTATGTTTACAACCAATGCAATAAGAATAATGGTGGTGGCCTTGTGGATATGAGGTTGGTCGCACGACATTACTCAGGGAACATCATTAGAAGGTTGGTTTTCAATGCAAGGCACTTTGGTAAAGGAAGAGAAGATGGAGGACCCGGATTTGAGGAGGTGGAACATATAGACGCAATTTTCACTGTTTTGAGATACCTCTTTGCATTCTCCATCTCTGATTTCGTTCCATGCTTGAGAGATCTTGACTTGGATGGTCATAAAAAGGAGTTGAAGAAGGCTACTAAGTTGATAATGAAGTATCATGACCCCTTAATCGAAGATAGGATTCAGCAATGGAAGAATGGCAAAAGAACACATCAAGAGGACTTGCTTGACGTTCTGATCTCATTGAAAGATACAAATGGTAGTCCACTTTTGACTCTTGATGAAATTAAGTCTCAAATTATGGATATGATGATTGCAACGGTGGACAATCCATCAAATGCATTTGAATGGGGACTCGCCGAGATGATAAATCAGCCGGAGATACTGCAAAAGGCGACGGAGGAAATAGATAGCGTGGTAGGTAAGGAAAGACAAGTTCAAGAATCAGACATTTCAAAACTCAATTATGTGAAAGCATGTGCAAAAGAAGTGTTTCGCCTTCACCCCATTGATGACATCAACGCTACCCATGTTGCCATGGAGGACACATTTATTGCGAACAACACCTACTTCATTCCAAAAGGTAGTCACATGGTTCTAAGGCGCCAAGGAATCGGAAAAAATCCAAGAATATGGGAAGAATCGTTGAAGTTTAAACCCGAACGTCATATACAAAAAGATAACGACGGGTTTAAGAACATAAATTTAAATGAACCGAGTTTAAATTTGATCACGTTCAGCACTGGAAGACGTGCATGTCCTGGAATCATGCTTGGGTCTACAATGACAATTATGTTGTTTGCTAGGATGCTGCATGGGTTCAATTGGAGTGTGCCACCAAATAAGACATCCATTGATCTCTCGGAATCAGAAGGAGGTACCATAAAAGCAAAGCCACTTGTGGCACTTGCAACCCCTCGGTTACCAGCGGAGGTGTATTATTGA 1428 0.4118 MIANRPTSRWIHKIMTDLKTEIACIQLGNIHVIPITSPEIAREILIKQDSIFASRPANWSSEYVSSGYLSTILVPYGEQWKKMKKVMANELVSPRRLQWLQDKRVEEADNIVSYVYNQCNKNNGGGLVDMRLVARHYSGNIIRRLVFNARHFGKGREDGGPGFEEVEHIDAIFTVLRYLFAFSISDFVPCLRDLDLDGHKKELKKATKLIMKYHDPLIEDRIQQWKNGKRTHQEDLLDVLISLKDTNGSPLLTLDEIKSQIMDMMIATVDNPSNAFEWGLAEMINQPEILQKATEEIDSVVGKERQVQESDISKLNYVKACAKEVFRLHPIDDINATHVAMEDTFIANNTYFIPKGSHMVLRRQGIGKNPRIWEESLKFKPERHIQKDNDGFKNINLNEPSLNLITFSTGRRACPGIMLGSTMTIMLFARMLHGFNWSVPPNKTSIDLSESEGGTIKAKPLVALATPRLPAEVYY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31080g00002 475 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 475 - -
Stsc31080g00002 475 SUPERFAMILY Cytochrome P450 10 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 276 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 362 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 319 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 137 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 Pfam Cytochrome P450 11 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 Gene3D Cytochrome P450 4 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31080g00002 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31080g00002 Stsc-Chr31080 2992 5323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31080g00002 4 474 Cytochrome P450 AT5G05260 54.008 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31080g00002 - K14984 gmx:100809902 627.476