Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31075g00003 ATGGCAAATCTCAGTAATGGCGACGACCACATCAATAATGGTTCTTTTGTCAAGATTCCAAAGATTAAGTTTACAAAGCTCTTCATCAATGGAGAATTCGTGGATTCAGTTTCAGGAAAAAGGTTTGAGACAGTGGATCCAAGAACAGAAGAAGTGATTACAGAAATAGCAGAGGCTACAAAAGAAGATATTGATATTGCCGTGAAGGCAGCACGTAAAGCCTTTGATTCTGGTCCATGGCCTCGCATGACTGGTGCTGAGAGAGCGAAGATTATGCTAAAATGGGCACAACTAATTGAAGAGAACATTGAAGAGATAGCAGCATTAGATACCATTGATGGAGGGAAGCTTTATAGTTGGTGTAAGAATGTGGATGTTCCTGAAGCATCAAATTTACTGCGTTACTATGCCGGTGCTGCTGATAAAATCCATGGAGAAGTGTTCAAAACTTCTAGGAACCTTCATTTGTATTCTCTTATGGAACCTGTTGGTGTTGTGGGACACATTATCCCTTGGAATTTTCCTACCATCATGTTCTTCACCAAGGCTAGCCCTGCCTTGGCTGCCGGCTGCACCATGGTTCTCAAGCCAGCCGAGCAAACGCCGCTCTCCGCTCTCTTCTATGCTCATCTTGCTAAGCTGGCTGGTATACCAGATGGAGTGCTTAATGTAGTACCTGGATTTGGTTCTATTGCTGGAGCTGCAATAGCCTCACATATGGATGTGGATGCGGTCAGTTTTACTGGTTCAACCGAGACTGGCCGCAAGGTAATGATGGCGGCAACCATGAGTAACTTGAAACCGGTTTCACTCGAATTAGGTGGCAAGTCCCCGGTCTTGATCTTTGATGATGCTGATGTTGACAAAGCTGTTGACCTTGCTCTCTTTGGGATCCTACACAACAAGGGAGAAATATGTGTTGCATTTTCCAGAGTTTATGTCCAAGAAGGAATTTATGATGAATTTGAGAAGAAGGTGGTGGAGAAGGCAAAAACATGGGTAGTAGGGGATCCATTTGACCCTAAAGTTCAACAAGGACCACAGACTAGTAAGGCACAATTTGAGAAAATTCTGTCCTATATTGAGCATGGAAAGAAAGAAGGAGCCACCCTTTTAACTGGGGGCAAAAGATTTGGCAACAAGGGCTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTAATATCACAAGATGAGATATTTGGACCTGTAATGGTGCTTTCTAAGTTCAAGTAA 1248 0.4311 MANLSNGDDHINNGSFVKIPKIKFTKLFINGEFVDSVSGKRFETVDPRTEEVITEIAEATKEDIDIAVKAARKAFDSGPWPRMTGAERAKIMLKWAQLIEENIEEIAALDTIDGGKLYSWCKNVDVPEASNLLRYYAGAADKIHGEVFKTSRNLHLYSLMEPVGVVGHIIPWNFPTIMFFTKASPALAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGSIAGAAIASHMDVDAVSFTGSTETGRKVMMAATMSNLKPVSLELGGKSPVLIFDDADVDKAVDLALFGILHNKGEICVAFSRVYVQEGIYDEFEKKVVEKAKTWVVGDPFDPKVQQGPQTSKAQFEKILSYIEHGKKEGATLLTGGKRFGNKGYYIEPTIFSNVKEDMLISQDEIFGPVMVLSKFK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31075g00003 415 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Stsc31075g00003 415 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 18 415 - -
Stsc31075g00003 415 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 415 IPR016163 GO:0016620
Stsc31075g00003 415 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 274 IPR016162 GO:0016491
Stsc31075g00003 415 Pfam Aldehyde dehydrogenase family 33 415 IPR015590 GO:0016491
Stsc31075g00003 415 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 29 294 - -
Stsc31075g00003 415 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Stsc31075g00003 415 FunFam Aldehyde dehydrogenase3 275 415 - -
Stsc31075g00003 415 SUPERFAMILY ALDH-like 18 415 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31075g00003 Stsc-Chr31075 10160 14510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31075g00003 4 415 Aldehyde Dehydrogenase Gene Family AT3G24503 70.460 0.0 597