Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31074g00004 ATGAATGATGCAATTTGTGTTGCTATTTTTCAGTCAAATACTGGTTTCTTGGAAGAGGAACTGAAGCGTGTGACAGCAGAAAACAAGAAATTGGCTGAAATGCTGTCTGTGGTTTGTGAGAACTACAACACTTTGAGGAACCACTTGATGGAATACATGAGGAAGAATCCTGAGAAGGAGCTTAGCCCTTCATCAAAGAAGAGGAAATCTGAGAGCAGCAACAACAACTGTGATCCAGTGGCATTGGCATCCAACAATGGGAACTCCGAGAGCAGCTCGACCGACGAAGAATCGTGCAAGAAGCCCAGGGAAGAAACCATCAAGGCTAAGACCTCTAGAGTTTATGTTCGGACGGAAGCATCCGATACTAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATACGGACAGAAAGTTACAAGAGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGTCCTGTGAAAAAGAAGGTGCAAAGAAGTGTTGAGGATCAATCTGTGCTGGTTGCAACTTACGAGGGCGAGCACAACCACCCCCTCCCTTCTCAGATGGAGGCGACATCCGGCTCGAACCGGTGTATGACCATAGGTTCGGTACCTTGCTCGGCATCTGTTAGCTCTTCTGCACCAACAGTTACTCTTGACTTGACAAAATCCAAACCCAACAATAACAACAATGATTCCAAGATTGCAACAAAACCAAAGGCTAATTCACCTGAACAAGTACCTAATGTTTTGGTGGAACAGATGGCTAGTTCATTGACCAAAGATCCAAATTTCAGAGCAGCTCTTGTTGCTGCACTTTCAGGAAGATTGATGCACAATAATTGA 852 0.4437 MNDAICVAIFQSNTGFLEEELKRVTAENKKLAEMLSVVCENYNTLRNHLMEYMRKNPEKELSPSSKKRKSESSNNNCDPVALASNNGNSESSSTDEESCKKPREETIKAKTSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPSQMEATSGSNRCMTIGSVPCSASVSSSAPTVTLDLTKSKPNNNNNDSKIATKPKANSPEQVPNVLVEQMASSLTKDPNFRAALVAALSGRLMHNN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31074g00004 283 ProSiteProfiles WRKY domain profile. 122 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00004 283 Pfam WRKY DNA -binding domain 128 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00004 283 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 17 279 IPR044810 GO:0003700
Stsc31074g00004 283 MobiDBLite consensus disorder prediction 56 105 - -
Stsc31074g00004 283 MobiDBLite consensus disorder prediction 56 73 - -
Stsc31074g00004 283 SMART WRKY_cls 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00004 283 MobiDBLite consensus disorder prediction 221 247 - -
Stsc31074g00004 283 FunFam WRKY transcription factor 40 112 189 - -
Stsc31074g00004 283 MobiDBLite consensus disorder prediction 74 93 - -
Stsc31074g00004 283 Gene3D WRKY domain 110 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00004 283 SUPERFAMILY WRKY DNA-binding domain 123 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31074g00004 Stsc-Chr31074 5902 7389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31074g00004 14 283 WRKY Transcription Factor Family AT1G80840 58.363 2.23e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc31074g00004 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31074g00004 - - gmx:100807966 394.43