Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31074g00003 ATGGATTGTTCTTCATGGATTAACACTTCCTTGGATCTCAACATTAATCCTCATCATAGAGTTCATGAGGAAGTTCCAAAGAAGCAGGTTGAAAGCAATCTTTTCTCATTGGGGTTGTCCATGGTTCCTTTGAAAGAAGAAGAAGAGTCAAATACTGGTTTCTTGGAAGAGGAACTGAAGCGTGTGACAGCAGAAAACAAGAAATTGGCTGAAATGCTGTCTGTGGTTTGTGAGAACTACAACACTTTGAGGAACCACTTGATGGAATACATGAGGAAGAATCCTGAGAAGGAGCTTAGCCCTTCATCAAAGAAGAGGAAATCTGAGAGCAGCAACAACAACTGTGATCCAGTGGCATTGGCATCCAACAATGGGAACTCCGAGAGCAGCTCGACCGACGAAGAATCGTGCAAGAAGCCCAGGGAAGAAACCATCAAGGCTAAGACCTCTAGAGTTTATGTTCGGACGGAAGCATCCGATACTAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAATACGGACAGAAAGTTACAAGAGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGTCCTGTGAAAAAGAAGGTAAATCCAACTAACTCTTCAAGAAAAAAGTTTAAAAATGTCTTTAAAATTGCATCACAAGCTAAGTCAGTTTTGTTGTTGCTTGGTTTAATTCAGGTGCAAAGAAGTGTTGAGGATCAATCTGTGCTGGTTGCAACTTACGAGGGCGAGCACAACCACCCCCTCCCTTCTCAGATGGAGGCGACATCCGGCTCGAACCGGTGTATGACCATAGGTTCGGTACCTTGCTCGGCATCTGTTAGCTCTTCTGCACCAACAGTTACTCTTGACTTGACAAAATCCAAACCCAACAATAACAACAATGATTCCAAGATTGCAACAAAACCAAAGGCTAATTCACCTGAACAAGTACCTAATGTTTTGGTGGAACAGATGGCTAGTTCATTGACCAAAGATCCAAATTTCAGAGCAGCTCTTGTTGCTGCACTTTCAGGAAGATTGATGCACAATAATTGA 1062 0.4266 MDCSSWINTSLDLNINPHHRVHEEVPKKQVESNLFSLGLSMVPLKEEEESNTGFLEEELKRVTAENKKLAEMLSVVCENYNTLRNHLMEYMRKNPEKELSPSSKKRKSESSNNNCDPVALASNNGNSESSSTDEESCKKPREETIKAKTSRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVNPTNSSRKKFKNVFKIASQAKSVLLLLGLIQVQRSVEDQSVLVATYEGEHNHPLPSQMEATSGSNRCMTIGSVPCSASVSSSAPTVTLDLTKSKPNNNNNDSKIATKPKANSPEQVPNVLVEQMASSLTKDPNFRAALVAALSGRLMHNN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31074g00003 353 Gene3D WRKY domain 148 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00003 353 MobiDBLite consensus disorder prediction 94 111 - -
Stsc31074g00003 353 MobiDBLite consensus disorder prediction 94 143 - -
Stsc31074g00003 353 Coils Coil 45 65 - -
Stsc31074g00003 353 MobiDBLite consensus disorder prediction 291 318 - -
Stsc31074g00003 353 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 349 IPR044810 GO:0003700
Stsc31074g00003 353 ProSiteProfiles WRKY domain profile. 160 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00003 353 SUPERFAMILY WRKY DNA-binding domain 162 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00003 353 SMART WRKY_cls 165 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc31074g00003 353 MobiDBLite consensus disorder prediction 112 131 - -
Stsc31074g00003 353 Pfam WRKY DNA -binding domain 166 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31074g00003 Stsc-Chr31074 5902 7879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31074g00003 35 353 WRKY Transcription Factor Family AT1G80840 50.606 7.09e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc31074g00003 WRKY 1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31074g00003 - - gmx:100807966 435.261