Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31065g00001 ATGGAAAATCATCATAATAGAACCCTTACGTTTGACACTAAACAATTTGTTTATGTCAAACCATCAAAACCCACACCTATTTACACTCTTTCACTCTCCACGATTGATAATATATCCGGTATGAATGGCTTTTGCTTTGTTGTTCATGTTTATGAATCACCAAAAGACAGCAAAAATAGTTTCCAAAAAGACCCTGCACTTATGATCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTACTACCCTTTGGCGGGTAGGATTGTAAAACATGCCGATGGGAAGTTGAGAGTTAACTGCAATGCAAATGGTGTTCCCTTTGTAGAAGCTATTGCTAATTGCAACCTTTCTTCTCTTAACTACCTTGATGGTAGTAACATTGAGATTGCAAAGCACTTGGTTCTTGATCTCGAATCTGAAGATGAACATGGCTTCCAAGTATACCCTATGGTGCTCAAGGTCACCAAGTTTCTTTGTGGGGGATTCACAATTGGGTTAGGAACCTCACACAATATAATTGATGGGAGTGGAACATCCCAATTCTTACAAGCCATAGCTGAATTCGTGAGCGGAAAAGGCGAGCCCTCGGTGAAGCCGGCATGGGAAAGAGAAAAGTTTGTTGGGTCAATTACCAAACAACCCTTAGAATTTCCCATGGACGAGGCTTCCGCCGCGGTCTCGCCTTACTTGCCCACCACAAAACTTGTGAATGCATGCTTTAAAGTTGACAATGAGAGCATAAAAAGGCTCAAGATGAGTATGATGAAGGAAATTAGCAACAACACAATGGAAGAAAACTTCACAAGCTTTGAGTGTCTTGCTTGCTATGTTTGGAGGGCAAGAACAAGAGCCTTGAAATTGAACAGTGATGGTAAAGTTATGTTGAGCATCCAAGTAGGGCTAAGGAAGCAGTTTGATCCTCCTTTGCCTGAAGGGTATTATGGGAATACTACTCTGGATGCAATATGTGTGTTGACCGTTAGAGAAGTCAACGAAAAGCAGCTGTCCCATGTGGCCAAAATGATCAAAGAAGCTAAGAGGGTTGTTCGGACGAAGGAACACATGAAGAGATTAATGGACACGTTGGCAACGGAAAACGAGGAGTTTGATTGGGATGGAAGGGGTGCATGCATGTGTTTGACTGAGTGGAAACATTTGGGTTTCTCGAAGAACATGGATTTTGGATGGACACAACCGGTGAATGTGGTTCCTGCTCCATGTGGTATGTTTGATAAGTTGTGTTTGTGCATTTTCTCGTCTCCGAGTAGCTTGGATCCTTCAATGGAGGGAGGTTCTAGGATCTTTGTTTCACTCCCCAACGCTGCTATGCCCAAGTTTAGGGAGGAGATTGAAGCTCTATCTAAATATCAAGCTTGTTAA 1377 0.4227 MENHHNRTLTFDTKQFVYVKPSKPTPIYTLSLSTIDNISGMNGFCFVVHVYESPKDSKNSFQKDPALMIKEALSKALFYYYPLAGRIVKHADGKLRVNCNANGVPFVEAIANCNLSSLNYLDGSNIEIAKHLVLDLESEDEHGFQVYPMVLKVTKFLCGGFTIGLGTSHNIIDGSGTSQFLQAIAEFVSGKGEPSVKPAWEREKFVGSITKQPLEFPMDEASAAVSPYLPTTKLVNACFKVDNESIKRLKMSMMKEISNNTMEENFTSFECLACYVWRARTRALKLNSDGKVMLSIQVGLRKQFDPPLPEGYYGNTTLDAICVLTVREVNEKQLSHVAKMIKEAKRVVRTKEHMKRLMDTLATENEEFDWDGRGACMCLTEWKHLGFSKNMDFGWTQPVNVVPAPCGMFDKLCLCIFSSPSSLDPSMEGGSRIFVSLPNAAMPKFREEIEALSKYQAC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31065g00001 458 PANTHER ACYL TRANSFERASE 4 14 450 - -
Stsc31065g00001 458 Pfam Transferase family 17 451 - -
Stsc31065g00001 458 Gene3D - 10 217 IPR023213 -
Stsc31065g00001 458 Gene3D - 229 449 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31065g00001 Stsc-Chr31065 1877 3425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31065g00001 19 404 Monolignol Biosynthesis Gene Families AT5G48930 27.833 4.82e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31065g00001 K20240 - gmx:100783730 496.123