Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31060g00004 ATGATGAAGAGGGGAGGTAGCAGCTGCTACATTTGGGCTATGAGTATGTTGGTGTTGTTTTTGGGAGTAAGTTCCCAACTTACAACAGATTTCTATAAGACATCATGTCCTAACCTTTTCAAAGTGGTAAGGACACAGGTTCAAAATGCTCTCATGAATGAGATGCGAATGGGTGCTTCTTTGCTTCGTCTCCACTTTCATGATTGCTTTGTAAATGGTTGTGATGGATCAATATTGCTGGATGGAGGCAACGATACAGAAAAGTTTGCAGGTGCAAACTTGAACTCTGCTAGAGGATTTGATGTTGTAGACACAATCAAAAGTTCTGTGGAAGCTGCTTGTAGTGGAGTTGTATCCTGTGCTGATATATTAGCCATAACCGCCAGAGATGCTGTCTTCCTTAGTGGTGGTCCGTTTTGGCATGTTCTATTAGGTAGAAGAGATGGGACAATCTCAAACATAACATTGGCAAATCAAGTTCTTCCTTCTCCATTTGATCCATTGAATACTATCATTTCAAAGTTTACTAATGCAGGCCTCAATCTCACTGATGTTGTTGCTTTATCAGGTGCTCATACTATTGGGAGAGGAAGATGTGTACTATTCAGCAATAGATTATTCAACTTCTCAGGAACAGGCTCACCTGATCCAACATTAGACACTACTATGCTTTTAGATCTCCAAAATTTGTGTCCCCAAAATGGTGATGGAAACACAACTGCTCCACTTGATAGGAACTCCATTGATCTATTTGACAACCACTATTTCCAGAACCTCCTCAACTCTAAGGGCCTTCTTAGTTCTGACCAGATACTCTTCTCTAGTAATGATGCTGTTTCAACTTCTAAGGCTTTGGTCCAAAACTACAGCAACAATTCTGCACTTTTCTTTGCAGATTTTGCTAATTCCATGACCAGGATGGGGAATATTAATCCTAAGACCGGCTCTGATGGAGAGATTAGGAAAACTTGTAGAGTCGTAAATAATTCCTAG 993 0.4038 MMKRGGSSCYIWAMSMLVLFLGVSSQLTTDFYKTSCPNLFKVVRTQVQNALMNEMRMGASLLRLHFHDCFVNGCDGSILLDGGNDTEKFAGANLNSARGFDVVDTIKSSVEAACSGVVSCADILAITARDAVFLSGGPFWHVLLGRRDGTISNITLANQVLPSPFDPLNTIISKFTNAGLNLTDVVALSGAHTIGRGRCVLFSNRLFNFSGTGSPDPTLDTTMLLDLQNLCPQNGDGNTTAPLDRNSIDLFDNHYFQNLLNSKGLLSSDQILFSSNDAVSTSKALVQNYSNNSALFFADFANSMTRMGNINPKTGSDGEIRKTCRVVNNS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31060g00004 330 FunFam Peroxidase 162 307 - -
Stsc31060g00004 330 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PANTHER PEROXIDASE 72-RELATED 20 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 Gene3D - 31 328 - -
Stsc31060g00004 330 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Stsc31060g00004 330 Gene3D Peroxidase, domain 2 162 307 - -
Stsc31060g00004 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Stsc31060g00004 330 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Stsc31060g00004 330 Pfam Peroxidase 43 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc31060g00004 330 FunFam Peroxidase 30 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31060g00004 Stsc-Chr31060 15813 17551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31060g00004 3 329 Peroxidase AT5G19890 59.939 4.70e-141 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31060g00004 K00430 - gmx:100817622 503.442