Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31057g00002 ATGCCGCAGAAATCAATGGCAAAGAAGAGGGCTTACGAGAAGATAAGGGAGGACCTGAAAGTTGATTCAAAGCCAAAGATGAACTTGGCTTCCTTTGTGACCACATCAATGGAGGAAGAATGCAACAAACTCATGATGGAATCCATGAACAAGAACTATGTTAACATGGATGAGTACCCTGCCACCACTGACCTTCACAATAGATGTGTGAACATGATAGCACGTTTGTTCAACGCTGAAATTGGAGAAAATGAGAATGCAGTTGGAACAGGAACTGTTGGATCTTCAGAGGCCATAATGCTGGCAGGCCTTGCTTTCAAGAAAAATTGGCAGAACAAGAGAAAGGCCCAAGGAAAGCCCTATCATAAGCCCAACATAGTCACTGGTGCCAATGTCCAGGTATGTTGGGAGAAATTTGCAATGTATTTCGATGTAGAGTTGAGAAAAGTGGAAGTGAGAGAAGGATACTATGTGATGGACCCAAATAAGGCTGTTGAAATGGTTGATGAGAACACTATTTGTGTGGCTGCAATCTTGGGTTCTACTTATAATGGAGAATTTGAAGATGTCAAGTTGCTTAACCACCTCTTACTACAACAAAACAACAAAAATGGATGGGAAACACCCATTCATGTTGATGCAGCAAGTGGTGGGTTTGTTGCTCCATTTCTTTATCCAGAGCTAGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATAAATGTCAGTGGCCACAAGTATGGTCTTGTTTATGCTGGCATTGGCTGGGTTATATGGAGAACTAAACAAGACTTGCCTCAAGAACTTATCTTCCATATTAATTACCTTGGAGCAGAACAACCCACCTTTACCCTTAATTTTTCTAAAGGGTCTAGTCAGATTGTTGCACAATATTATCAATTAATTCGCCTTGGTAGAGAGGGATACCAAAGAGTAATGGAAAAATGCAAAGAAAATGCAATGGTGGTGAAACAAGGATTGGAGAAGACAGGATGTTTTAACATACTCTCAAAGGACAACGGTGTTCCTATGGTAGCCTTTTCACTTAAGGACCGAAGTCGTCATGGCGGCGACGAGTTCAAGATATCCAACATGCTACATCACCACCATGGTTGGGTCGTGCCAGCATATCCGATGCCATCCGGTGCGGAGCACATCACGGTGCTCCGAGTGGTGGCCAGGGCTGAGTTTTCGCGTGAAATGGCCGAAAAACTCGTGCTTGACATGAAAAATGTGTTGCATGAACTTGGGAAGATTGATCCCGCATCAAAAGTGACCAAAATTAACAAAGAAATTGCTCAAAGAAAAATCATTGTTCCGAAATCCAACCAGAATCACAAAGTCTTGGCAGGATAG 1356 0.4263 MPQKSMAKKRAYEKIREDLKVDSKPKMNLASFVTTSMEEECNKLMMESMNKNYVNMDEYPATTDLHNRCVNMIARLFNAEIGENENAVGTGTVGSSEAIMLAGLAFKKNWQNKRKAQGKPYHKPNIVTGANVQVCWEKFAMYFDVELRKVEVREGYYVMDPNKAVEMVDENTICVAAILGSTYNGEFEDVKLLNHLLLQQNNKNGWETPIHVDAASGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKQDLPQELIFHINYLGAEQPTFTLNFSKGSSQIVAQYYQLIRLGREGYQRVMEKCKENAMVVKQGLEKTGCFNILSKDNGVPMVAFSLKDRSRHGGDEFKISNMLHHHHGWVVPAYPMPSGAEHITVLRVVARAEFSREMAEKLVLDMKNVLHELGKIDPASKVTKINKEIAQRKIIVPKSNQNHKVLAG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31057g00002 451 Gene3D - 35 329 IPR015421 GO:0003824
Stsc31057g00002 451 NCBIfam glutamate decarboxylase 1 416 IPR010107 GO:0004351|GO:0006536|GO:0030170
Stsc31057g00002 451 FunFam Glutamate decarboxylase 330 420 - -
Stsc31057g00002 451 Gene3D - 330 419 - -
Stsc31057g00002 451 FunFam Glutamate decarboxylase 35 329 - -
Stsc31057g00002 451 PANTHER GLUTAMATE DECARBOXYLASE 1 434 IPR010107 GO:0004351|GO:0006536|GO:0030170
Stsc31057g00002 451 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 350 IPR002129 GO:0016830|GO:0019752|GO:0030170
Stsc31057g00002 451 Gene3D - 1 34 - -
Stsc31057g00002 451 SUPERFAMILY PLP-dependent transferases 1 416 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31057g00002 Stsc-Chr31057 15055 21123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31057g00002 1 422 Calmodulin-binding Proteins AT2G02010 74.645 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31057g00002 K01580 - gmx:100812201 716.457