Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31051g00004 ATGGAGCTTTTTCAATCTTCAACAACCATCTTTCTTTTCTTCTCCCTCTTGGCTTTCACTTTCTTCTTATTTCGACTTCGTCGAAAGCTGCCATACCCACCAGGCCCAAATGGGCTACCCATCATAGGAAACATGTTGATGATGGACCAACTCAGTCATCGTGGCCTTGATAACCTTGCCAAACAATACGGTGGGCTTGTTCATCTCCAAATGGGCTCCCTCCATATAGTAGCAATCTCAACACCACAAATGGCACGTGAGGTTCTCCAGGCCCAAGACATCTCTTTCGCAAACCGGCCCGCAAATGTTGCAATTTCGTACTTGACTTACGACCGGGCCGACATGGCTTTCGCTAACTACGGCCCGTTTTGGCGGCAGATGCGTAAGATATGTGTAATAAGGCTTTTTAGTCGCAAACGGGCCGAGTCATGGGCCTCGGTCCGTGAGGAAGTTGAAGAAACGGTTCGAACCGTAGCTTCAAATGTTGGTTCAGCCATGAATTTGGGTGAACTGATTTTTGCTCTAACGAGGAGGATCACCTTTAAGGCCGCGTTTGGGGCGAGCTTGAATGAAGGGGAAGAAGAATTCATGGGAATCTTACAAGAGTTTTCAAAGCTCTTTGGAGCTTTTAACATTGCTGATTTTATTCCTTGGTTGGGTTGGTTGCAACAGTTGCATGCACAAGATTTTCACAAGAGATTGGTCAATGCACGAAATTCACTTGATGTTTTTATTGATAAGATCATTGATGATCATATCACTAAGAGGAAGATTGGGATTGATAATAATGATGATGCAGAAAAGGATATGGTTGATGAGCTTATGGATTTTCTTAATGAAGGTAATGCTGGTGATGCTGATTCTCTCAGGCCAGACAATTCACAATCAATCCTTAAGCTTACTAGAGACAACATCAAAGCTCTTATCATGGATGTGATGTTTGGAGGAACTGAGACAGTGGCATCAGTGATAGAATGGATCATAGCGGAGCTCTTGAGAAGCCCAATGGACCTCCAGAAGGCCCAACAAGAGCTTGTTGATGTTGTGGGCTTGGACCGAAGATTGAATGAATCGGATCTGGAAAAGTTGACTTTCCTGAAGTGCGTGGTCAAAGAAGCGTTGCGTCTCCACCCTCCGATTCCAATGCTTCTTCACGAGACCGCAGAGGACAGCGTCATTGAGGGTTACGCAGTCCCAAAGGGGACACGTGTCTGGATCAACGCGTGGTCCATAGGACGCGACAAGAGCGCGTGGGATGTCCCAGATACCTTCAACCCTTCAAGATTCTTGAATGAAGGCGCTCCCGATTTCAAAGGGAGTGATTTTGAGTTCATTCCATTTGGGTCGGGTCGGAGGTCGTGCCCAGGGATACAACTTGGGCTTTATACTGTGGAGATAGCTGTGGCCCATTTTCTTCATTGCTTCAATTGGGAGTTACCCAATGGAATGAAGCCCAATGAGCTTGATATGAATGATGTGTTTGGGCTCACTGCTCCAAGAGCAGTTCAACTTGTTGCAGTACCTACTTATCGTCTCAAGTGTCCTCTTTGTTAA 1554 0.4595 MELFQSSTTIFLFFSLLAFTFFLFRLRRKLPYPPGPNGLPIIGNMLMMDQLSHRGLDNLAKQYGGLVHLQMGSLHIVAISTPQMAREVLQAQDISFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVIRLFSRKRAESWASVREEVEETVRTVASNVGSAMNLGELIFALTRRITFKAAFGASLNEGEEEFMGILQEFSKLFGAFNIADFIPWLGWLQQLHAQDFHKRLVNARNSLDVFIDKIIDDHITKRKIGIDNNDDAEKDMVDELMDFLNEGNAGDADSLRPDNSQSILKLTRDNIKALIMDVMFGGTETVASVIEWIIAELLRSPMDLQKAQQELVDVVGLDRRLNESDLEKLTFLKCVVKEALRLHPPIPMLLHETAEDSVIEGYAVPKGTRVWINAWSIGRDKSAWDVPDTFNPSRFLNEGAPDFKGSDFEFIPFGSGRRSCPGIQLGLYTVEIAVAHFLHCFNWELPNGMKPNELDMNDVFGLTAPRAVQLVAVPTYRLKCPLC 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31051g00004 517 Pfam Cytochrome P450 33 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 SUPERFAMILY Cytochrome P450 33 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 CDD CYP71-like 62 504 - -
Stsc31051g00004 517 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PANTHER CYTOCHROME P450 84A1-RELATED 1 516 - -
Stsc31051g00004 517 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31051g00004 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc31051g00004 517 FunFam Cytochrome P450 84A1 25 510 - -
Stsc31051g00004 517 Gene3D Cytochrome P450 25 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31051g00004 Stsc-Chr31051 18430 20876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31051g00004 40 516 Monolignol Biosynthesis Gene Families AT4G36220 66.806 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31051g00004 K09755 - fve:101305825 718.383