Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31037g00004 GGCAATGGCGTATTCACAAAAGTTCAAGATGCCATTGATTCTATTCAACCCAATAATAATCAATGGGTCAGGATTTATATTAATCCTGGCATATACACAGAGATGGCAAGCCTTCCCATGGATGAGCCATCTGTTATTTTACAAGGAGGAAGCATACACAACACAATAATCACATATGCTGATCATTATCCAGCAAATCCAAGTTCTACATTCGTTTTTGAGGCATCCAATGTGATTGTCACAGATATTACTTTCAAGAACTCATATAATGTAGCAAAGTTACCAAGGAAAATAAAAGAAAGAAAGATGCAAGAAACACAAATTGTTCCTGCTGTGGCGGCTACTGTATATGGTGACAACAGTACCTTCTATAGGTGTGGTTTTATTGGTTACCAAGACACCTTGTTTGATGCAACAGGAGACATTATTACAAAGAGTGTTACATCCAAGAAATGCATAATAAATGCGGCAGGGAGGGACATCAATCTTGCAGGGTTTGTAACAGCACAAGGACGAGGAAAACCAGAAGGTGATCCTAATGGTGGATTTGTATTTAACAGATGTGCAATAAATGGAACTGGGAAAGTGAATTTGGGAAGAGCATGGGGTCCTGAGGCTAGAGTTATTTTTCGTGGAACATATTTTGGGGAATTAATAACCCCTCAAGGATGGGATGCTTTTAATGGGAAAGGACAGGAGGATAAGATCACATTTGCAGAAGTGAATTGTAATGGACCAGGAAGCAATACTAGTGATCGAGTTTCATGGGAGAAAAAACTAAGCATATCAGAGACAACTCAATATTCTTATTCATCTTTTATCAATTATGATGGATGGCTTGACAATTTGCCCATCCCTCTTCAGTAG 867 0.3864 GNGVFTKVQDAIDSIQPNNNQWVRIYINPGIYTEMASLPMDEPSVILQGGSIHNTIITYADHYPANPSSTFVFEASNVIVTDITFKNSYNVAKLPRKIKERKMQETQIVPAVAATVYGDNSTFYRCGFIGYQDTLFDATGDIITKSVTSKKCIINAAGRDINLAGFVTAQGRGKPEGDPNGGFVFNRCAINGTGKVNLGRAWGPEARVIFRGTYFGELITPQGWDAFNGKGQEDKITFAEVNCNGPGSNTSDRVSWEKKLSISETTQYSYSSFINYDGWLDNLPIPLQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31037g00004 288 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 281 - -
Stsc31037g00004 288 SUPERFAMILY Pectin lyase-like 2 286 IPR011050 -
Stsc31037g00004 288 Gene3D - 1 288 IPR012334 -
Stsc31037g00004 288 Pfam Pectinesterase 1 275 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31037g00004 Stsc-Chr31037 14897 18795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31037g00004 5 233 Carbohydrate Esterase AT2G19150 40.079 1.98e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31037g00004 - - var:108336510 268.47