Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31037g00003 ATGGCAACAAAATCCTTAGCCATAGCAATGTTTGTTGTTGTGGTTAGCACCGTTGTAGTGTTAGGGAATGAAGATCATAAGATTCCAGACATCATAAGCAATAGTAACAAGTTCACAGAAGAAAAAGAAGCCAAAGGTGGTGATGATTGTGGTGGAAAAGACATTGTAAAAACTATCATTGTTAATCAACATGGTGCTAGTAGCAATAATGGTACATTATTTACAAGAATTCAAGATGCTATTGATTCTATTCAAGTCAACAATAATCGATGGGTGAAGATTTATATTCATGCTGGCACATATAAGGAGAAGGTTAATGTTCCCAGGAATAAGCCATGCATTGTTTTAGAAGGAGAGAACAGGCACAAGACAATAGTCACATATGGTGATCATCAAAAAACAGATACAAGTGCTACTTTTACTTCATCACCATCCAATGTTGTTGTCACTGGAATCACTTTCAAGAACTCATTTAATGTGAGGTTGGGAAGAGAAATAAAAGATGAGATAGAAGAAGAGGGAAAAATCAAACCAGCAGCTGCAGCAAGAATATATGGAAACAACACAGCCTTCTATAAGTGTGGTTTCATTGGTTATCAAGACACTTTGTATGATATAATGGGAAGTCATTACTTCAAAAAATGCTATATTCAAGGTGAAGTCGATTTCATTTTTGGCAATGGCCAATCCTTTTACGAGAATTGCATAATAAATGCGACGGGAGGAGAATTACCGGGATTCGTAACTGCTCAAAAAAGAGATTCGTCAAGAGATGAAACTGGTTTTGTGTTTGAGAGAGGTCATGTTCTTGGAAGTGGTAAAGTGAATTTAGGAAGAGCTTGGGGTGTTTATTCTAGGGTTATTTTTCATGGAACATACTTTGAATCTTTAATTACACCTCAAGGTTGGAATGCTTGGGATCATGTTGGACAAGAAGACAAATTTACTTATGCTGAAGTTAATTGCAAAGGACCAGGAAGCAATACAAAAGATCGTGTGAAATGGGAGAAGAAGTTAAATTATTCGGATATGCAAAAATTTTCTTTATCATCTTTTGTTAATAAAGATGGATGGATTCAAAATTTACCTATTAGCCTTAATTCATAG 1107 0.3541 MATKSLAIAMFVVVVSTVVVLGNEDHKIPDIISNSNKFTEEKEAKGGDDCGGKDIVKTIIVNQHGASSNNGTLFTRIQDAIDSIQVNNNRWVKIYIHAGTYKEKVNVPRNKPCIVLEGENRHKTIVTYGDHQKTDTSATFTSSPSNVVVTGITFKNSFNVRLGREIKDEIEEEGKIKPAAAARIYGNNTAFYKCGFIGYQDTLYDIMGSHYFKKCYIQGEVDFIFGNGQSFYENCIINATGGELPGFVTAQKRDSSRDETGFVFERGHVLGSGKVNLGRAWGVYSRVIFHGTYFESLITPQGWNAWDHVGQEDKFTYAEVNCKGPGSNTKDRVKWEKKLNYSDMQKFSLSSFVNKDGWIQNLPISLNS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31037g00003 368 Gene3D - 52 368 IPR012334 -
Stsc31037g00003 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 56 360 - -
Stsc31037g00003 368 Pfam Pectinesterase 72 355 IPR000070 GO:0030599|GO:0042545
Stsc31037g00003 368 SUPERFAMILY Pectin lyase-like 58 363 IPR011050 -
Stsc31037g00003 368 FunFam Pectinesterase 53 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31037g00003 Stsc-Chr31037 11974 13685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31037g00003 49 312 Carbohydrate Esterase AT2G19150 47.584 6.11e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31037g00003 - - gmx:100787453 384.415