Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31034g00003 ATGAACAGACAAGGGCAGCGATCTGGGGCGTCGGGGGTCCAACAACACCGTCACTACTCCGAAAACCTTCTCGAACCTTCCTCCAACTCTAGCTGGCTTCACTCCTCTTCCAGTCTCATTCCTCCTCTTCAGGATTATAATTTGTATGGTGGGGGAGGAAGCAGAATGTATAGGAACACCGTTCAGAGGAGCTTCAGTGGAGGGAGTGATTATTTCTATGACGCGGAGGCATCCGCGCTGCCCAAGAAGAAGTATGGCGAGGAAGTTTCGCCGGCCGATTTCAGCCCGGGTCTTTTGGATATCCATTCATTTGATACTGAGCTTCTCCCTGAGATGCCGGCTTCTGATGTATCTGATGCTGCCCTGTATCAGCCTACCCTTGGTAGAGGGTTTGATGATGCTGAGCCTTACATGTTGAGTAAGCAAAGTGGCAGAAGTCGCACGCTTGACAACAACTTCATGAGTAATGTTTCTTCTACTGATAAGGAGAAATCTAGCTCTGTAGCAAAGATTAAAGTTGTGGTTCGCAAAAGACCACTTAACAAGAAGGAAATAGCAAAGAATGAGGAAGACATTATAGAGACAATATCTAATTCTTTAACAGTGCATGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTAGAGAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAGGAGGTTACAAATGATGAGGTATATCGTGAAACAGTGGAGCCCATAGTGCCAATAATTTTTCAACGGACTAAGGCGACTTGTTTTGCATATGGGCAAACAGGAAGTGGGAAAACTTACACAATGAAGCCACTGCCTCTAAAAGCTTCAAGGGACATCTTGAGATTGATTCATCATACTTACAAGAATCAGGGGTTTCAGTTGTTTGTTAGTTTCTTTGAAATATATGGTGGAAAGCTTTTTGATCTGCTTAATGATCGGAAAAAACTGTGCATGAGAGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCAAGTATCTGATGTAGAGATGATCAAGGAACTGATAGACCAAGGCAATGCCACACGAAGTACTGGCACCACTGGTGCGAACGAGGAATCTTCAAGGTCACATGCAATACTTCAGCTTGCTATCAAAAGGTCAACTGATGGCAATGGATCAAAGCCTCCTCGTGTTGTTGTTATTGGCAAGCTCTCCTTCATTGATCTTGCTGGAAGTGAGCGTGGAGCAGATACCACAGATAATGACAAACAAACAAGAATAGAAGGTGCTGAGATCAATAAAAGCTTACTCGCCCTGAAGGAGTGCATAAGAGCTCTTGATAATGATCAGGGACACATCCCCTTCAGAGGCAGTAAATTGACTGAAGTTTTAAGGGATTCATTTGTTGGTAATTCCCGCACTGTTATGATATCATGCATATCGCCAAGCTCTGGTTCATGTGAACATACTCTCAATACATTAAGATATGCTGACAGAGTAAAAAGCCTATCAAAGGGTCACAATTCTAAGAAGGATACTTTATCTTCAATCAACCTTAAGGAATCTACTATGATTCCTGTATCTTCTTTTACTGCATCTACCTATGAGGATCGCGTGGCTGATGCATCACTGGAAGATAATGATGTGGATGAACTTAGCCCTCCCGAAGAGTACTATGAGGAGATGAAACCATCATTAAAGAAATATGGAAAGATAGAGCCATCGTATGGAGTGACAGATGACAAATTAAAGAAGCAGAATAGTCAGATCAAGTGGAAGGACCTCTCAAATGTTGAACCTAAAACTGTACATTCAGATGATGATTTGAATGCCCTCTTAAAGGAGGAGGAAGATCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACGATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATGTTACAAAGCTAAATGCCATTCTAACTCAGAAAGCTGCTGGTATCTTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAATCGTTTAAAGGAGCATAATGTTCTGGTTTCATCTAATGGCAACTAA 2064 0.421 MNRQGQRSGASGVQQHRHYSENLLEPSSNSSWLHSSSSLIPPLQDYNLYGGGGSRMYRNTVQRSFSGGSDYFYDAEASALPKKKYGEEVSPADFSPGLLDIHSFDTELLPEMPASDVSDAALYQPTLGRGFDDAEPYMLSKQSGRSRTLDNNFMSNVSSTDKEKSSSVAKIKVVVRKRPLNKKEIAKNEEDIIETISNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLIHHTYKNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVEMIKELIDQGNATRSTGTTGANEESSRSHAILQLAIKRSTDGNGSKPPRVVVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGHNSKKDTLSSINLKESTMIPVSSFTASTYEDRVADASLEDNDVDELSPPEEYYEEMKPSLKKYGKIEPSYGVTDDKLKKQNSQIKWKDLSNVEPKTVHSDDDLNALLKEEEDLVNAHRKQVEETMNIVREEMNLLVEADQPGNQLDDYVTKLNAILTQKAAGILQLQTRLAHFQNRLKEHNVLVSSNGN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31034g00003 687 SMART kinesin_4 168 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 ProSitePatterns Kinesin motor domain signature. 394 405 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc31034g00003 687 ProSiteProfiles Kinesin motor domain profile. 170 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 495 IPR027417 -
Stsc31034g00003 687 PRINTS Kinesin heavy chain signature 395 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 PRINTS Kinesin heavy chain signature 359 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 PRINTS Kinesin heavy chain signature 250 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 PRINTS Kinesin heavy chain signature 445 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 PANTHER KINESIN-RELATED PROTEIN 6 81 527 IPR027640 GO:0003777|GO:0007018
Stsc31034g00003 687 Pfam Kinesin motor domain 176 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc31034g00003 687 Gene3D Kinesin motor domain 146 498 IPR036961 -
Stsc31034g00003 687 Coils Coil 605 636 - -
Stsc31034g00003 687 FunFam Kinesin-like protein 150 498 - -
Stsc31034g00003 687 CDD KISc_KIF2_like 170 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31034g00003 Stsc-Chr31034 16764 21511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31034g00003 169 495 Calmodulin-binding Proteins AT5G65930 33.828 7.37e-44 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31034g00003 K10393 - gmx:100799100 1032.32