Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31033g00005 ATGGCACCTTCATTATCAATTCTAAAACACTTGTCATATGTGAAGTCCTCATCTACTCTTTACGTTTTGTCAATAATAATTGGCATCATCACCATCTTTCTTATGCTTAAACTCACAAGAACAAGAAGAAACAAATCCAATAATCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAAGTAGGAACATTGCCACACCACTCCTTCTATGAGCTCTCAAAGAAGCATGGCCCTCTCATGTTCCTTCAATTAGGGCAAATTCCAACCCTAGTGATTTCCTCGGCCGACACAGTCAAAGAAATCACCAAAAATCATGACCTTGTTTTCTCAAGTAGGCCGTTGCCCACGGCAGCAAAAATCTTTGTACATAGAGGCAAAGACGTGGCATTTTCGTCCTATGGCGAAGAATGGAGACAGAAAAGAAAATTATGTGTTCTTGAGCTTCTGAGTCTCAAGAGGGTGAAGTCATTTCAATCCATAAGGGAAGAAGAGGTTGTCGAATTGATTGACTCGATTCGCGAATCTTGCGCTTCAAGTAAAGTAGGGAGTGTGATCAATCTTAGTGAGATGATGATTGCAACATCAAACAATATAGTATCAAGATGTGTTCTTGGACAAAAGTATGATACCCCAAAAGATGGAAGAAGCAATAGCTTTGGAGATCTTGGAAGGAAATTGATGAAACATTTTGCTGATTTTTGTCTTGGTGATTTTTACCCTAAATTGGGTTGGGTTGATGTTCTTAGAGGGCTTGTTCCCGAATTCAAGACCACCTTTTCTGGATTAGATGCATGCTTTGATGAAGTGATTGAAGAACATAAGAGGATGAAGAAAAATAATGGTGGTGATGGTGATGAAGAACTATTATCTATTAGAAAAGATTTTGTCGAGATATTGCTTCAACTTCAAGACAATGGTGTGCTTGATTTTCAGCTCACTGGAGAAGACATCAAAGCAATTCTAGCGGACATGTTCGTTGGAGGAAGTGATACTACTTCAACAACTCTAGAATGGACGTTTGCTGAGCTCCTCAAGAACCCAAATGTCATGAAGAAAGCTCAAGAAGAGGTAAGAAGAGTTGTGGGGAGCAAATCAAAAGTGGAAGAAAATGATGTAAATCAAATGACCTATTTGCAATTTGTGATCAAAGAAAGTCTAAGATTACATCCACCTCTCCCTCTTTTAATTCCTCGAGAAACATTATCAGGTGTGAAAGTAAAAGGGTATTATATTCCTCCCAAAACAAGGGTATTTTTTAATGTATGGGGAATTCAAAGGGATCCCGAGGTATGGGAAAATCCAGAAGAATTTATTCCTGAGAGATTTGAAAACAACCAAGTTGATTTCAAAGGACAAGATTTCCAATTACTCCCATTTGGTACTGGAAGAAGGGGTTGCCCTGGAATTTCATTTGGACTTACTTCTGCTGAATACATTCTGGCTAATCTTCTATATTGGTTTGATTGGAAGCTATGTGATGAGAATGGTGAAGTGTTACATGACATAGACATGAGTGAACTGTGTGGGCTCACTGTCACTAAGAAAGTACCACTTCATCTAAAACCCATACCATACAACTCTGGTATTAGAAATTAG 1608 0.3862 MAPSLSILKHLSYVKSSSTLYVLSIIIGIITIFLMLKLTRTRRNKSNNLPPSPPKLPLIGNLHQVGTLPHHSFYELSKKHGPLMFLQLGQIPTLVISSADTVKEITKNHDLVFSSRPLPTAAKIFVHRGKDVAFSSYGEEWRQKRKLCVLELLSLKRVKSFQSIREEEVVELIDSIRESCASSKVGSVINLSEMMIATSNNIVSRCVLGQKYDTPKDGRSNSFGDLGRKLMKHFADFCLGDFYPKLGWVDVLRGLVPEFKTTFSGLDACFDEVIEEHKRMKKNNGGDGDEELLSIRKDFVEILLQLQDNGVLDFQLTGEDIKAILADMFVGGSDTTSTTLEWTFAELLKNPNVMKKAQEEVRRVVGSKSKVEENDVNQMTYLQFVIKESLRLHPPLPLLIPRETLSGVKVKGYYIPPKTRVFFNVWGIQRDPEVWENPEEFIPERFENNQVDFKGQDFQLLPFGTGRRGCPGISFGLTSAEYILANLLYWFDWKLCDENGEVLHDIDMSELCGLTVTKKVPLHLKPIPYNSGIRN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31033g00005 535 PANTHER CYTOCHROME P450 71B11-RELATED 35 527 - -
Stsc31033g00005 535 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 SUPERFAMILY Cytochrome P450 50 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 Coils Coil 354 374 - -
Stsc31033g00005 535 Gene3D Cytochrome P450 34 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc31033g00005 535 CDD CYP71-like 79 522 - -
Stsc31033g00005 535 FunFam Cytochrome P450 83B1 37 525 - -
Stsc31033g00005 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Stsc31033g00005 535 Pfam Cytochrome P450 50 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31033g00005 Stsc-Chr31033 14390 17200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31033g00005 18 529 Cytochrome P450 AT3G26300 43.689 2.51e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31033g00005 K20617 - gmx:100792382 631.713