Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31029g00001 ATGGCTGAGAACTCAAACCTCCTGCTATGTTCCGAGAACAACATCACTTGTTTTGATGATGGTGATGGTGGTGATGGTTTTGAGCGTAATGTTGCTGCTGCTGCTGCTGCTGTTGGGTCTGGAATCTTGCCATGTCGGGACCACAGCAACAACCTTAACTCCGACCAACCATGTCCGAGTTCAGAAAACCGTGGATCGGGTCCATTGTCTTGTTTTGATGTTCTGAGTGAAGAAACTATCAAAGGCATGGTGGAAGGGGAGAAAGATCATTTGCCAAAGGAGGATTATCTTCAGAGGCTACGTAGTGGGGACTTGGACCTCACTGGTAGGAGAGAGGCCATTGATTGGATTTGGAAGAGAGGTAAGAGTTGGACTATGCAATTGTTAGCGGTAGCTTGCTTGTCGATTGCGGCGAAAATGGAGGAGATTAAAGTGCCGCAATCCGTCGACATACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATCCAAAGAATGGAACTATTGGTATTAAGCACATTGAGATGGAAAATGCAAGCTTTAACTCCTTTTTGCTTCATAGATTATTTCCTAAGGAAGATCAATTTTGAGCAACATTTGTCAAATCGATCCATTTCGAGATCGGTACAGCTCATCCTTAGCATAATTAGAGGGATTGACTTCTTGGAGTTCAGGGCTTCTGAAATCGCAGCGGCTGTGGCGATTTCTGTTTCAAGGGAGATGCAACAAGCAAAAAATATCGATAAGGCCGTAGCAAGCTTCTTCATTGTAGAGAAGGAGAAAGTTCTAAAGTGTGTTGAATTGATAAGAGACTTGACATTGATGAATGTTTCAAATTTAGGCACAAAACATGTGCCATTTGTGCCTCAAAGCCCAATTGGGGTGCTTGATGGTTGTGGATGCTTGAGCTTTAAGAGTGATGAATTAACAAATGTTGGTTCATCATGCCCAAATTCCTCAAATAATAGTCCAAAAACTAAAAGGTTCAAATCAGAATAA 1005 0.4229 MAENSNLLLCSENNITCFDDGDGGDGFERNVAAAAAAVGSGILPCRDHSNNLNSDQPCPSSENRGSGPLSCFDVLSEETIKGMVEGEKDHLPKEDYLQRLRSGDLDLTGRREAIDWIWKRGKSWTMQLLAVACLSIAAKMEEIKVPQSVDIQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPFCFIDYFLRKINFEQHLSNRSISRSVQLILSIIRGIDFLEFRASEIAAAVAISVSREMQQAKNIDKAVASFFIVEKEKVLKCVELIRDLTLMNVSNLGTKHVPFVPQSPIGVLDGCGCLSFKSDELTNVGSSCPNSSNNSPKTKRFKSE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31029g00001 334 MobiDBLite consensus disorder prediction 315 334 - -
Stsc31029g00001 334 PANTHER CYCLINS 125 273 IPR039361 -
Stsc31029g00001 334 Pfam Cyclin, N-terminal domain 125 180 IPR006671 -
Stsc31029g00001 334 Gene3D - 122 181 - -
Stsc31029g00001 334 CDD CYCLIN_AtCycD-like_rpt2 184 271 - -
Stsc31029g00001 334 SUPERFAMILY Cyclin-like 165 276 IPR036915 -
Stsc31029g00001 334 Gene3D - 182 270 - -
Stsc31029g00001 334 Pfam Cyclin, C-terminal domain 184 277 IPR004367 -
Stsc31029g00001 334 SUPERFAMILY Cyclin-like 70 180 IPR036915 -
Stsc31029g00001 334 SMART Cyclin_C_2 183 310 IPR004367 -
Stsc31029g00001 334 FunFam D6-type cyclin 173 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31029g00001 Stsc-Chr31029 1572 3631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31029g00001 76 257 Core Cell Cycle Gene Families AT5G65420 52.113 3.20e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31029g00001 K18810 - gmx:100794010 325.479