Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc31010g00003 ATGGCTGCATTCACCTGCTCCTTCTTCTTCATCTTCCTCTTGCTTTTAACCTTCCAAACCTCAATCACCATGGCCACATATTCAAGTTACCAAGATTCAACCAAGTGCAGCCATGGTGGTCCTTCCATCCACCACCCATTCCACATAAAAGGACTCAGTCCACTTCATGAATCTCTCCCTGGCTTTGAGCTCCTCTGCAAAGAAAACCTCACCACCATCCACTTTCCATCTTATGGTGATTTGGTTGTGAAATCCATTACCTATGATACCAGAAAGATTCAACTTCTTGATCCCAAGAACTGTGTCCATGGTGTCTTTCTCAACCTCAATCTCTCATTTACACCTTTCCAATATTACTATGTTCTGAAGAACTACACATACCTCAATTGCTCTACAAAGCTCTCCACTCCTCCTTTCACTGAGGTTCCATGCTTGAGTGGCTCAGATTCTCATGTTTACACTGTTGACCCTGAACTGCATGTTCCTGATTCTTGCAACGGTTTCAAAACTGTGGGGATTCCTTTTAAGTATAGCCCTTATATCTCAGACAATAGTCTTGGTCTTGCATTGACATGGAACTTGCCTCATTCTGAAGAAACAAAAGAAGCAATAAACAAGACCACAGATTCCCACACAGCACGTTATACAGCTTTAGGATTGAGCATCTGTTCTGTGGTGGCAGCAATTGCACTTATAATAATAAGCATAATAAAGGTTAGTGGGTCCACGTGGAATTGCGGTGAGAAAGAAGATCCATTATTATTGCAGAGCTTGCCAAATGTCTAG 786 0.4224 MAAFTCSFFFIFLLLLTFQTSITMATYSSYQDSTKCSHGGPSIHHPFHIKGLSPLHESLPGFELLCKENLTTIHFPSYGDLVVKSITYDTRKIQLLDPKNCVHGVFLNLNLSFTPFQYYYVLKNYTYLNCSTKLSTPPFTEVPCLSGSDSHVYTVDPELHVPDSCNGFKTVGIPFKYSPYISDNSLGLALTWNLPHSEETKEAINKTTDSHTARYTALGLSICSVVAAIALIIISIIKVSGSTWNCGEKEDPLLLQSLPNV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc31010g00003 261 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 236 IPR046948 -
Stsc31010g00003 261 Pfam Wall-associated receptor kinase galacturonan-binding 35 97 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc31010g00003 Stsc-Chr31010 7674 9009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc31010g00003 36 205 C3H Transcription Factor Family AT2G25410 31.285 6.20e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc31010g00003 - - ahf:112747752 416.772