Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30g00032 | ATGGATGAAAGATCAAGAAATGAAGTATCTCCTCCTCATCACCATCTCATGAAACTTGAACTCAGGCTTGCTCCACCTGGTGCTGATGAACAACAACAACACTGGTCAAGAACAACAACAAAGAGACATGATGACTCTTCTTCTGTGCTATCTCTTGGTTACTTCCCTCATCATCATGCAACCATTAAAGCTTCTCCTTCTCCTTCTTCTTCTCCACAACAAGCACCACTACCGTTGCAGAATAATAATAATAATAATAATAATAATAATAATGCAGACAAGAAAGTTTTCTCACCCTCTTCTGCAAACACAGCTGTTCCCAACATTTCTCAGAAAAGAACTGCTCCAGGTCCAGTAGTGGGTTGGCCACCAATCCGTTCATTCAGGAAGAACCTTGCAAGTAGCAGTTCTTCAAAGCCACCTCCTCCTCCTCCTGAGCACCATAACAAGGTGGTGCCTGCTGCTGCTGCTTTGGACAAGAACAACAACAGCTATGGTGGGAAAGGCATGTTTGTGAAGATCAACATGGATGGTGTTCCCATTGGTAGGAAAGTTGACCTCAATGCTTATGATAGCTATGAAAATCTCTCCAATGCTGTGGACCAACTCTTCAGAGGCCTTCTTGCTGCTCAAAGAGATAATTCTTCTGGTGGTAGTGGAGTTAACAAGCTACAAGAGGAAGAGAAAGTGATAACAGGATTATTAGATGGAAGTGGAGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCCTGGCACATGTTCGTATCAACAGTGAAGAGGCTGAGAGTGTTGAAGAGTTCTGAGCTTTCTGCCTTTACCCTTGGTGGTAATAAGCAAGACAAAGATGCAACTTGA | 882 | 0.4297 | MDERSRNEVSPPHHHLMKLELRLAPPGADEQQQHWSRTTTKRHDDSSSVLSLGYFPHHHATIKASPSPSSSPQQAPLPLQNNNNNNNNNNNADKKVFSPSSANTAVPNISQKRTAPGPVVGWPPIRSFRKNLASSSSSKPPPPPPEHHNKVVPAAAALDKNNNSYGGKGMFVKINMDGVPIGRKVDLNAYDSYENLSNAVDQLFRGLLAAQRDNSSGGSGVNKLQEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGGNKQDKDAT | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30g00032 | 293 | Gene3D | - | 165 | 286 | - | - | |
Stsc30g00032 | 293 | MobiDBLite | consensus disorder prediction | 63 | 111 | - | - | |
Stsc30g00032 | 293 | SUPERFAMILY | CAD & PB1 domains | 162 | 272 | - | - | |
Stsc30g00032 | 293 | FunFam | Auxin-responsive protein | 164 | 287 | - | - | |
Stsc30g00032 | 293 | Pfam | AUX/IAA family | 19 | 280 | IPR033389 | - | |
Stsc30g00032 | 293 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 16 | 278 | IPR003311 | GO:0005634|GO:0006355 | |
Stsc30g00032 | 293 | MobiDBLite | consensus disorder prediction | 22 | 150 | - | - | |
Stsc30g00032 | 293 | ProSiteProfiles | PB1 domain profile. | 169 | 275 | IPR000270 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30g00032 | Stsc-Chr30 | 131911 | 135197 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30g00032 | 173 | 284 | B3 DNA Binding Superfamily | AT4G23980 | 33.929 | 1.89e-14 | 71.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX or IAA | Stsc30g00032 | AUX_IAA | 2.8e-71 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30g00032 | K14484 | - | gmx:100804593 | 303.908 |