Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30g00025 ATGAAGATCAATAGAAAAGTAGTGTTTGTGCTATTTGCATTTGTCTTCCTTGTAGTGAGGGGGAATGCACAAGACACACTTGTGCCTGCAATCATGACATTTGGTGACTCTGCTGTGGATGTTGGCAACAATGACTACCTGCCTACAATTTTCAAGGCTAACTACCCTCCTTATGGAAGGGACTTTCTCAACCACAAACCTACTGGCAGGTTTTGCAATGGCAAATTAGCTACTGATATTACTGCTGATACACTGGGATTTAAGAGTTATGCACCTGCATATCTTAGTCCACAAGCATCAGGGAAGAACCTGCTTATTGGAGCAAACTTTGCTTCAGCTGCCTCTGGTTATGATGAAAAGGCTTCCATCTTGAATCATGCAATTCCATTGTCTTTACAGTTGAATTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGCAAGAAAGCAGCATCAATCATTAAGGATGCATTGTACTTATTGAGTGCTGGAAGTAGTGATTTTGTCCAAAATTATTATACCAATCCTTTGATCAACAAACTTGTCACCCCTGACCAGTATTCTTCATACCTAGTCAAATCATTCTCAAGTTTTGTTAAGGATTTGTATAAATTGGGAGCTAGGAGAGTTGGAGTGACTTCCCTTCCACCATTGGGATGCCTACCTGCTGCAAGAACCTTGTTTGGATTCCACGAGAACGGTTGTGTTTCGAGAATCAACAATGATGCCCAAGGATTTAACAAGAAAATCAACTCAGCAGCGAAAAATCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTATCTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTCGCCGAGGCGAGGAAAGGCTGCTGTGGTACTGGGATAGTTGAGACAACATCATTATTGTGCAATCCAAAATCACTAGGAACTTGCTCCAATGCAACTCAGTATGTGTTTTGGGACAGTGTCCATCCTTCTCAAGCTGCAAACCAAGTTCTAGCTGATGCATTGATTGTTCAAGGCATAGCCCTTATCTCATAA 1062 0.4143 MKINRKVVFVLFAFVFLVVRGNAQDTLVPAIMTFGDSAVDVGNNDYLPTIFKANYPPYGRDFLNHKPTGRFCNGKLATDITADTLGFKSYAPAYLSPQASGKNLLIGANFASAASGYDEKASILNHAIPLSLQLNYFKEYQGKLAKVAGSKKAASIIKDALYLLSAGSSDFVQNYYTNPLINKLVTPDQYSSYLVKSFSSFVKDLYKLGARRVGVTSLPPLGCLPAARTLFGFHENGCVSRINNDAQGFNKKINSAAKNLQKQLPGLKIVIFDIYKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSLGTCSNATQYVFWDSVHPSQAANQVLADALIVQGIALIS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30g00025 353 PANTHER GDSL ESTERASE/LIPASE EXL3 13 344 - -
Stsc30g00025 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Stsc30g00025 353 Gene3D SGNH hydrolase 19 348 IPR036514 -
Stsc30g00025 353 FunFam GDSL esterase/lipase APG 20 349 - -
Stsc30g00025 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Stsc30g00025 353 SUPERFAMILY SGNH hydrolase 32 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30g00025 Stsc-Chr30 102610 104024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30g00025 6 345 Pollen Coat Proteome AT1G75910 34.985 9.29e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30g00025 - - gmx:100795716 629.402