Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30999g00001 ATGGTCACAAGAACCCAACAGAACAGCTCTCCATATTCATTCACATCCTCTCCTCCAACACCTTCTTCAAAGAACTTTGAGGTTGATGAGATGTTAATAGACAAAGGGCAAGAACAATTTGGAGGTGAAACAATGGTGGGGACTCCCATCAATGGAAGATCAAGGCAAGCTTTTTCACTTCTGAATGGTGTTGGTGGTGGTGGCCATGATCTTACTCCTGGTAGTGCTCCACCAAGCAATGCTGGATCAGACTATGGCATAATAGAGTTCACAAGAGAGGATGTGGAAGCACTCTTAAATGAGAAATCCAAAAGGAAAGACAGATTTAATTACAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACCTTGAGATGAGCTACTCACTAGAACATGAGAGGTTGAAGAACTCATTGGAACTAACACAGCAAAAATGCATGGAAATTGAGCTGCTGCTAAAAATCAAGGAAGAAGAACTAAACTCAATTATCACAGAAATGAGAAGGAATTGCACTAATTTGCAAGAAAAATTGATCAAGGAAGAAACAGAAAGGACGGCTGCAGCAGAATCTCTCGAGAAAGAGCGGGAGGCCAGGATTAACATCGAGAGGTCGCATACCACTTTGTCTGAGGACCTTGGGAGAGCACAAAGAGAGATCCAAAGTGCAAATCAGAAGATATCCTCGCTCAACGAGATGTATAAACGGTTACAGGATTACATAACAAGCTTACAACAGTATAATGGAAAACTTCATACAGAGCTTTCAACAGTTGAAGATGAACTAAAACGTGTTGAGAAAGAAAAGGCTAGTGTGATGGAGAATATCACCATGTTAAAGGGTGAACTTACATTATCCATTGCTTCTCAAGAAGAGGCTGTAAAACAGAAGGATGTTCTAGTTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGAAGAACGAGACCGGCAACTGTCTCAAGTGCAAATGCTGAGTTCTGAATTAGAGAAAGTTAAAGAATCTACTGAAAACTCATCTTCTGAAGTGGACAAGTTGACTTTAAAAGTGAATGAACTAGAGGCAGAATGTTCTTTGAAAGATAATCAGATAAAGGAATTGCATGAGCAGCTAGCAACTGCAGAGAAGAAACTACAGGTGTCTGATATATCAGTAATTGAGACAAGGACTGAATATGAAGGGCAACAGAAATTCATAAACGAGTTGCAACGACGCTTGGCGGATGCAGAATATAAACTTATCGAAGGGGAGATGCTGCGGAAAAAATTACACAATACCATTTTGGAATTAAAAGGGAACATCCGTGTTTTCTGTCGAGTGAGGCCATTGTTGCCCGACGAAAACTGTAGTACAGAAGGCAAGATCTTTAGTTATCCAACATCAATGGAAGCTTCTGGAAGAGCCATTGACCTAGCTCAAAATGGCCAAAAACATTCTTTTACCTTTGATAAAGTTTTTGCACCGGATTCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACATATACAATGATGGGCAGGCCTGGACATCCTGAGGAAAAGGGGTTGATACCTCGCTCGTTAGAACAAATATTTCAAACAAAACAGTCTCAGCAGCCTCAAGGCTGGAAATACGAAATGCAG 1737 0.4007 MVTRTQQNSSPYSFTSSPPTPSSKNFEVDEMLIDKGQEQFGGETMVGTPINGRSRQAFSLLNGVGGGGHDLTPGSAPPSNAGSDYGIIEFTREDVEALLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLEMSYSLEHERLKNSLELTQQKCMEIELLLKIKEEELNSIITEMRRNCTNLQEKLIKEETERTAAAESLEKEREARINIERSHTTLSEDLGRAQREIQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTVEDELKRVEKEKASVMENITMLKGELTLSIASQEEAVKQKDVLVSEVASLRGELQQVREERDRQLSQVQMLSSELEKVKESTENSSSEVDKLTLKVNELEAECSLKDNQIKELHEQLATAEKKLQVSDISVIETRTEYEGQQKFINELQRRLADAEYKLIEGEMLRKKLHNTILELKGNIRVFCRVRPLLPDENCSTEGKIFSYPTSMEASGRAIDLAQNGQKHSFTFDKVFAPDSSQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQ 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30999g00001 579 Coils Coil 150 195 - -
Stsc30999g00001 579 Coils Coil 217 251 - -
Stsc30999g00001 579 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 578 IPR027417 -
Stsc30999g00001 579 MobiDBLite consensus disorder prediction 1 24 - -
Stsc30999g00001 579 SMART kinesin_4 445 575 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30999g00001 579 Coils Coil 259 293 - -
Stsc30999g00001 579 Pfam Microtubule binding 429 579 IPR031852 GO:0008017
Stsc30999g00001 579 Gene3D Kinesin motor domain 425 579 IPR036961 -
Stsc30999g00001 579 PANTHER KINESIN-LIKE PROTEIN KLP-3 303 578 IPR027640 GO:0003777|GO:0007018
Stsc30999g00001 579 Coils Coil 308 342 - -
Stsc30999g00001 579 Gene3D - 115 422 - -
Stsc30999g00001 579 Coils Coil 350 391 - -
Stsc30999g00001 579 MobiDBLite consensus disorder prediction 1 25 - -
Stsc30999g00001 579 ProSiteProfiles Kinesin motor domain profile. 447 579 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30999g00001 Stsc-Chr30999 76 4706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30999g00001 184 563 Calmodulin-binding Proteins AT5G65930 28.321 1.55e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30999g00001 K10405 - gmx:100784221 956.051