Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30959g00004 ATGGGTGATAATGATATCAAGCACATTCTTCACTCCCAAATCCCTCAAACTTCTAAACCTGACTCCCTAGATCACCATAGCCCTGGTAGTTTTGCTACCCCACCTAGTGATTCTGCAAACTTGGCCACCAAAAGATTGAAAAAACCTCGTGGTAGGCCACGCGGCTCAAAGAATAAGCCAAAGCTACCCATTTTCATAAGGGAGGTAAATGAACATGGCATGCGTCCGATTCTTATTCAGATGGCCCCAGGAGTTGATGTGATTGGGGCTTTAATCAACTTCGTCGTGCCCCGCCACATCAGAATATCGATTCTTAGTGCTTGTGGATCGATCTCTGATGCGGCGATTCGCAGCACACTACCTTTAAACACTAACACAATTGGCTTATCCATGAGAGGACCGTTTAATATGATGTCCCTCTCAGGGACCTATTATGATGACCATGTGCGGCCTGCATGTTCTTCTTTCTCAATTCTTCTTGGAGGAACACATGGCCAAGTTTTTGGTGGGATCGTTGCTGGGAAGGTTGTGGCCGCAGGAACTGTTAAAGTTATGGCTGCCTCGTTTAAGAGGACTGAGTTTTATGGAGGGGACGACAACGTTAATAGCAACAAGAATAATAACGTCGTTAGGGTATCTACATATAAAGTTGGTAATCCTAATATAGTTACTCGAAAAACTGTGGTTACTAAGCTTGTTCCTCTTCATATTGGCAATAACTATAGTGGTGGCGGTGGCAACGTTGCTGGTGTTGCTACTAATGTGAAGAATGAGATAGTAGTTATCGATGATAACTATCAGATTTAA 807 0.4362 MGDNDIKHILHSQIPQTSKPDSLDHHSPGSFATPPSDSANLATKRLKKPRGRPRGSKNKPKLPIFIREVNEHGMRPILIQMAPGVDVIGALINFVVPRHIRISILSACGSISDAAIRSTLPLNTNTIGLSMRGPFNMMSLSGTYYDDHVRPACSSFSILLGGTHGQVFGGIVAGKVVAAGTVKVMAASFKRTEFYGGDDNVNSNKNNNVVRVSTYKVGNPNIVTRKTVVTKLVPLHIGNNYSGGGGNVAGVATNVKNEIVVIDDNYQI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30959g00004 268 MobiDBLite consensus disorder prediction 12 40 - -
Stsc30959g00004 268 CDD DUF296 75 189 IPR005175 -
Stsc30959g00004 268 Gene3D - 75 206 - -
Stsc30959g00004 268 MobiDBLite consensus disorder prediction 12 62 - -
Stsc30959g00004 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 196 IPR014476 GO:0003680
Stsc30959g00004 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 190 IPR005175 -
Stsc30959g00004 268 ProSiteProfiles PPC domain profile profile. 71 211 IPR005175 -
Stsc30959g00004 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 73 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30959g00004 Stsc-Chr30959 15865 16776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30959g00004 30 195 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.918 3.83e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30959g00004 - - adu:107496595 226.868