Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30955g00001 ATGGCAAAGAGATCAGATTTTGCACAGAAGCTTTTGGATGATCTTAGGCTAAGGAAGGAAAAGATGGGTGTTGCTGCATCTCAACAGTCTCAGAGGACTAGCCAATCACAACCTGTAGATGCATATGCTTACTCCAAGCAAACAAGTGTTGGATCCAGGAACAGAAAATCCAATGACATTGTAAGTTCAAGAAATGGAGATATGCTGAATAGGTCTAGCAGAAGCCATAGATCTTCTTCAGTCAATGGTGAGGTTTCAAATCAGATAGTTTCATATGGAAGAGGCCAGAGCTCGGTTAAAATGGATGATGTTTCCTTAGCCATAGCCTTCGCTTTCGAGAATGGCGCCGCGAAACCAACAAGAGCTGATTCGTCTTACTATAGCAATAACAATAATAGTTCAACTTTGGCTTTTCTTCACCAAATCAAGAAGGGAACAATGGAATTCGGCATGATGGATAGACAAGGAAACATGGTTAGGCAACAAGCTTCAACAAACAATTTTAAAGGCCTCTCCCCTATGCAGATAAACGAGATATCAAAAGGCGCACAGAGACTAAACCAGATACTAAGAGCTTGCTCCAATGGTTTCAACATTGATAGATATTCAATTGAAGTGGCGAAGGAGCTTTTCCAAGGTGCTATTGATTTGGAACAGTCCCTCAGGATGCTGGTAGAGCTGCAGCAGAATTCAGAGTACTTGATTGCGCCGCATAAGAAAAACCGGATCAAGTTATTGGATGAAGACAGCGAAGATGATGATGACAGCAACAAAACAATTAGAGCATCTGAGGAAAACCAATTGGTGCCACCAATTTTCTCCTTTGACAAGAGATCTAGGCATACCCTTATGCAGGGGAAAATTATTCTGACAAACTCTAAAGAAGGCAGGAACTCAAATACCAAAAAGCAAGATGGAAAGATTTCAAGAGCTTCTCAAAAGCATACAAATAGATCTAGCTCTGAAATTAAGAACCTCAATGCTGTTTCAGAGCAGAAAAGCCACTCTGCCTCGGTGAAATCTGACACAGAGAAAGCAAGGATTCCAAGTGTAGTTGCAAAACTGATGGGGCTAGATAACTTGCCGGATAAGGCAGAACCGAAAAACATGCCGCAGAAGGATTCAGGTAATGCACAGAAAATTAGAGGAAATCAAGGAATGACAGTGCAGTATGCTGGTGCAAAGGAAAGAACAAAGAAGGCTGAAGAGAATAGCAACAAAGAAACAGAAAATTTGGTAGCTATGAAGAAACAAAGAGTGCTAGAAGCCTTTAGCATGGCTGCAACAACTCATGATGAAGAACAATTTTTTGGTGCCAATAAGAATTCGTTCGGCGAAAAGGCCAGCCCCAAGGTAATTTCTCAGAATGGAAAACCACTATGGAGTGAACTGTATGGAATAAAAACACTGAATGGTTTCGAGAAGCCAAAGCATAACATCAGTGCTGCTAATATGACAGAACAGAAGAGCACAGTAAAGGGCAGGATCAATGGTGAACAAGTGAATGAAAGATTGCAAGTTAAGCCTTCAATGCAGGAAGAGAAAGAGATCAATGTTAGTAATGTCCAAATTCTGAAAAGAAATGCATACAAACAGAACATGAACAATCAGAAGAAGCCTGAGAAGAATCTAACAGATCAGAAGTCATACATGCTCTCAAAATATGGGCCTCAAGAAGGGAAAAATCACAGTGAACAGCGACTCCAGCAGAGGGAGAAACAAATGCCGCAGGCCAGATTACAAGGAGGGAGTGAATTGAATTTGAGAAGTTCAAAAAACCAGAATAGGCTCATTAGTTCTCATAAGAAGCAGAACTCTGCAGAGAATTTGGAAGCTATGAAGCTGGAAGGAACTTTAGGAAAACAGTATGATGATTTTGCCAAACACGAAAAGTCCAATGGCTCCAATGAGAAAGTGAAAGAAATTGTTAATCGGAAGCCGGGTGTCAAAGTGATGGTGGATGAAAAGATTGTTCCTAAACTGGCCAATATGAAAGTGAAAAATACCAGAAAGCAAAAAGTTGACATGCCTAGGAAGATTGTTGAAGTGTCTAATGAAGGAAATGGAAGGAAGCTCATTGAGAAAGTGAAACAGCAAATTCATATTTTGCATGATGCTAGACAAGGAGCAATAGATAGATTCAATGGCTTTAAAGATGCGAAGGGAGAAATGGTTGACATCATGAACGCTAATGAAACAGCAGCTGTGGCTGAATCTCCGGATCAGAGAAGCCAACCACATAAAGAAGGCGACCTGGCTCCAACATCATACATTTCTGATGGCAGAGAATTCCATAGCCTAAAGGGAACAGTTGCTTTAACTCGAAATCATTTGGATCATGCTGCTCCTGTGGTAACAAATGATGGATTCAAGAGTGGTGAACTTGCATTAAATACAACAAATGGAACTCATGAAGAAAGCATGAGTACTAATAATAACCACTTACCAAAAAAGTATCAAAATATATCTGCAAAGAGAACCCAAAAGCCACTAACAGAAAGTGAAATCCGCCTGAAGAGTATCTTGGTCGCAAACCGATCATTCCTCAGCACTTCAGAAGCTCTATTCAGGCTCAACATTCCATTCAGCATTCTGCAAGATGGTAACACCGGCGGTCAGAACAGTGAAGGCGAATGCAAAGAACTCATGTTAGACTGCGGATATGAAGTAATGAAGCGAAAGGGGATACTGTCAGAACTCAAAGCTTATCCATTCTCAAACATATCAATAGATACAATGAGCATAACATCCTTGGATGACTTGGTTAGGCTACTGAACAATGACATTGAGAAGCTAAGATTCTATGGAAGGAACAACAGAAATTTCAATGCCAATGTGGAGGACTACCTGCCGAAAATGCTTGAACTCGACATATTCAGTCGAGAGCAAGACATAGACTGTATGTGGGATTTTGGTTGGAAGAATGAGACATTTGCATTAATTGAAAGATGTGATGTTGTAAAGGATATGGAAAAACATGTCCTGAATGTGCTTTTGGATGAAATCACCAGAGACCTTATGCTTCAAGGAGGACTCAAAGTGGCAACCATATAA 3054 0.405 MAKRSDFAQKLLDDLRLRKEKMGVAASQQSQRTSQSQPVDAYAYSKQTSVGSRNRKSNDIVSSRNGDMLNRSSRSHRSSSVNGEVSNQIVSYGRGQSSVKMDDVSLAIAFAFENGAAKPTRADSSYYSNNNNSSTLAFLHQIKKGTMEFGMMDRQGNMVRQQASTNNFKGLSPMQINEISKGAQRLNQILRACSNGFNIDRYSIEVAKELFQGAIDLEQSLRMLVELQQNSEYLIAPHKKNRIKLLDEDSEDDDDSNKTIRASEENQLVPPIFSFDKRSRHTLMQGKIILTNSKEGRNSNTKKQDGKISRASQKHTNRSSSEIKNLNAVSEQKSHSASVKSDTEKARIPSVVAKLMGLDNLPDKAEPKNMPQKDSGNAQKIRGNQGMTVQYAGAKERTKKAEENSNKETENLVAMKKQRVLEAFSMAATTHDEEQFFGANKNSFGEKASPKVISQNGKPLWSELYGIKTLNGFEKPKHNISAANMTEQKSTVKGRINGEQVNERLQVKPSMQEEKEINVSNVQILKRNAYKQNMNNQKKPEKNLTDQKSYMLSKYGPQEGKNHSEQRLQQREKQMPQARLQGGSELNLRSSKNQNRLISSHKKQNSAENLEAMKLEGTLGKQYDDFAKHEKSNGSNEKVKEIVNRKPGVKVMVDEKIVPKLANMKVKNTRKQKVDMPRKIVEVSNEGNGRKLIEKVKQQIHILHDARQGAIDRFNGFKDAKGEMVDIMNANETAAVAESPDQRSQPHKEGDLAPTSYISDGREFHSLKGTVALTRNHLDHAAPVVTNDGFKSGELALNTTNGTHEESMSTNNNHLPKKYQNISAKRTQKPLTESEIRLKSILVANRSFLSTSEALFRLNIPFSILQDGNTGGQNSEGECKELMLDCGYEVMKRKGILSELKAYPFSNISIDTMSITSLDDLVRLLNNDIEKLRFYGRNNRNFNANVEDYLPKMLELDIFSREQDIDCMWDFGWKNETFALIERCDVVKDMEKHVLNVLLDEITRDLMLQGGLKVATI 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 288 345 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 22 85 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 361 380 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 736 758 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 24 85 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 573 606 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 298 312 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 554 608 - -
Stsc30955g00001 1017 Coils Coil 391 418 - -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 313 336 - -
Stsc30955g00001 1017 PANTHER OS01G0228800 PROTEIN-RELATED 8 1007 - -
Stsc30955g00001 1017 Pfam DUF761-associated sequence motif 338 364 IPR032795 -
Stsc30955g00001 1017 MobiDBLite consensus disorder prediction 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30955g00001 Stsc-Chr30955 15229 19660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30955g00001 1 451 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 34.361 9.61e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30955g00001 - - aip:107644060 1759.96