Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30954g00005 ATGGAATCCAACAATGAACTAGGTAGTGGCATGTTCTCTGTCATAGGTTCTAGTTTCTTAGGATTAGACCATAATAATAACAATAATAATAATAATAATAACCCTTCACAACAACAACAAAATCTTCAACAAAGAAACCAACCCCAAATGGTTCAATTTGGTTCTTCTTCTTCTTCTCATCAACAACAACAACAAATCAATTATGGGAATACTAATAATTTATCTAAGAACAAGCACCAACAAGGTTCTACTCTAAGTGATGAAGATGAATTACAAGGATTCAATAATAATGCAGATGCTGATAGTAATAGTAACAAGATGAAGAACATTAGTAGTAGTATCTCATCACCATGGCAGAGAATGAAATGGACTGATACCATGGTTAGGCTCTTGATAATGGCTGTTTACTACATTGGTGATGAAGGTGGTGGTGCCGGCGGCAGCAGCAACGGTGGTGGTGGTTCATCAGAAGCAAGTGCTGATCCAAATGCGAAGAAGAAGATGATGATGAACAAGGGACAACAACAACAAGGAGGGGGGTTGATTCTTCAGAACAAGAAAGGGAAGTGGAAATCAGTGTCAAGAGCAATGATGGAGAAAGGCTTCTATGTGTCACCACAACAGTGTGAGGACAAGTTCAATGATCTGAACAAGAGGTACAAGAGGGTGAATGATGTTCTTGGAAGAGGAACAGCTTGCAAGGTTGTTGAGAATCACAAGTTGTTGGACACAATGGATCACTTGTCACCAAAGGCCAAAGAAGAAGTGAAGAAGTTGCTCAATTCAAAGCACCTTTTCTTTAGAGAGATGTGTGCTTATCATAATAGTTGTGGCCATGGTAGTGGTGGTGTTGGTGATGTTTCTCATCAATCTCAATTTCAACAAGAGAAAGAGGAGAAAGAAATAGGGTGTGAAGAAGAGGAACATCATCATGATGATAGTGATGATGATGATTATGACGACGAAGAAAACGACGACGAAGTCTCTGAGGATTATTTTGATGAGGATGAAGATGAATTAGGAGAAGGTGGTTCAAAGGGTCGTCATCATCATCTTGGTCATCATCATCATGATAGTAAGAGGCAAAAGAAATCATCATCATCATCATGTGAATTGATGATGAAAGAGTTGAGCAATGAGGTGAATGGTGTATTGGAAGATAAGGGGAAGAGTGTTTTGGAGAAGAAGCAATGGTTAAAGAACAAGATAGTGAAGTTGGAGGAGAAGCAAATAAGGTATGAAGGAGAAGGGTTTGAGATTGAGAAACAAAGATTGAAATGGAGAAAGTATAGTAGCAAGAAGGAGAGGGAGATGGAGAGATCAAAGCTTGATAATGAGAAGAGAAGGTTGGAGAATCAGAGAATGATTTTGATCATTCACCAAAAGGAACTTGAATTGAAACATCAACAACATTGA 1416 0.3856 MESNNELGSGMFSVIGSSFLGLDHNNNNNNNNNNPSQQQQNLQQRNQPQMVQFGSSSSSHQQQQQINYGNTNNLSKNKHQQGSTLSDEDELQGFNNNADADSNSNKMKNISSSISSPWQRMKWTDTMVRLLIMAVYYIGDEGGGAGGSSNGGGGSSEASADPNAKKKMMMNKGQQQQGGGLILQNKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDVLGRGTACKVVENHKLLDTMDHLSPKAKEEVKKLLNSKHLFFREMCAYHNSCGHGSGGVGDVSHQSQFQQEKEEKEIGCEEEEHHHDDSDDDDYDDEENDDEVSEDYFDEDEDELGEGGSKGRHHHLGHHHHDSKRQKKSSSSSCELMMKELSNEVNGVLEDKGKSVLEKKQWLKNKIVKLEEKQIRYEGEGFEIEKQRLKWRKYSSKKEREMERSKLDNEKRRLENQRMILIIHQKELELKHQQH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30954g00005 471 Coils Coil 433 453 - -
Stsc30954g00005 471 MobiDBLite consensus disorder prediction 283 370 - -
Stsc30954g00005 471 MobiDBLite consensus disorder prediction 21 115 - -
Stsc30954g00005 471 MobiDBLite consensus disorder prediction 310 340 - -
Stsc30954g00005 471 Gene3D - 123 222 - -
Stsc30954g00005 471 PANTHER F16F4.11 PROTEIN-RELATED 1 469 - -
Stsc30954g00005 471 MobiDBLite consensus disorder prediction 348 362 - -
Stsc30954g00005 471 Pfam Myb/SANT-like DNA-binding domain 184 272 IPR044822 -
Stsc30954g00005 471 MobiDBLite consensus disorder prediction 292 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30954g00005 Stsc-Chr30954 21299 23617 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc30954g00005 Myb_DNA-bind_4 3.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30954g00005 - - ahf:112728885 496.123