Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30954g00004 ATGAAGAACATTAGTAGTAGTATCTCATCACCATGGCAGAGAATGAAATGGACTGATACCATGGTTAGGCTCTTGATAATGGCTGTTTACTACATTGGTGATGAAGGTGGTGGTGCCGGCGGCAGCAGCAACGGTGGTGGTGGTTCATCAGAAGCAAGTGCTGATCCAAATGCGAAGAAGAAGATGATGATGAACAAGGGACAACAACAACAAGGAGGGGGGTTGATTCTTCAGAACAAGAAAGGGAAGTGGAAATCAGTGTCAAGAGCAATGATGGAGAAAGGCTTCTATGTGTCACCACAACAGTGTGAGGACAAGTTCAATGATCTGAACAAGAGGTACAAGAGGGTGAATGATGTTCTTGGAAGAGGAACAGCTTGCAAGGTTGTTGAGAATCACAAGTTGTTGGACACAATGGATCACTTGTCACCAAAGGCCAAAGAAGAAGTGAAGAAGTTGCTCAATTCAAAGCACCTTTTCTTTAGAGAGATGTGTGCTTATCATAATAGTTGTGGCCATGGTAGTGGTGGTGTTGGTGATGTTTCTCATCAATCTCAATTTCAACAAGAGAAAGAGGAGAAAGAAATAGGGTGTGAAGAAGAGGAACATCATCATGATGATAGTGATGATGATGATTATGACGACGAAGAAAACGACGACGAAGTCTCTGAGGATTATTTTGATGAGGATGAAGATGAATTAGGAGAAGGTGGTTCAAAGGGTCGTCATCATCATCTTGGTCATCATCATCATGATAGTAAGAGGCAAAAGAAATCATCATCATCATCATGTGAATTGATGATGAAAGAGTTGAGCAATGAGGTGAATGGTGTATTGGAAGATAAGGGGAAGAGTGTTTTGGAGAAGAAGCAATGGTTAAAGAACAAGATAGTGAAGTTGGAGGAGAAGCAAATAAGGTATGAAGGAGAAGGGTTTGAGATTGAGAAACAAAGATTGAAATGGAGAAAGTATAGTAGCAAGAAGGAGAGGGAGATGGAGAGATCAAAGCTTGATAATGAGAAGAGAAGGTTGGAGAATCAGAGAATGATTTTGATCATTCACCAAAAGGAACTTGAATTGAAACATCAACAACATTGA 1098 0.4062 MKNISSSISSPWQRMKWTDTMVRLLIMAVYYIGDEGGGAGGSSNGGGGSSEASADPNAKKKMMMNKGQQQQGGGLILQNKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDVLGRGTACKVVENHKLLDTMDHLSPKAKEEVKKLLNSKHLFFREMCAYHNSCGHGSGGVGDVSHQSQFQQEKEEKEIGCEEEEHHHDDSDDDDYDDEENDDEVSEDYFDEDEDELGEGGSKGRHHHLGHHHHDSKRQKKSSSSSCELMMKELSNEVNGVLEDKGKSVLEKKQWLKNKIVKLEEKQIRYEGEGFEIEKQRLKWRKYSSKKEREMERSKLDNEKRRLENQRMILIIHQKELELKHQQH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30954g00004 365 MobiDBLite consensus disorder prediction 204 234 - -
Stsc30954g00004 365 Pfam Myb/SANT-like DNA-binding domain 78 166 IPR044822 -
Stsc30954g00004 365 Gene3D - 17 116 - -
Stsc30954g00004 365 PANTHER F16F4.11 PROTEIN-RELATED 7 363 - -
Stsc30954g00004 365 MobiDBLite consensus disorder prediction 242 256 - -
Stsc30954g00004 365 MobiDBLite consensus disorder prediction 177 264 - -
Stsc30954g00004 365 MobiDBLite consensus disorder prediction 186 203 - -
Stsc30954g00004 365 Coils Coil 327 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30954g00004 Stsc-Chr30954 21299 24014 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc30954g00004 Myb_DNA-bind_4 3.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30954g00004 - - ahf:112728885 409.453