Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30951g00002 ATGTTGCTGCTGCTGCTACTTCTCACAAGTCTGATTCTTCTTCTTCCATCACTTCAGCCATGGCTGCACTTGTCCGAGCTCCACCCAAAGATTTCATCCTCATCAAGCATGAATGGGCTGCCATACGCATTCAGGCACTCTTCCGAGCTTTCTTGGAGAGCTTTGAGAGCCTTGAGGGCAGTGGTAAGGTTGCAAGCTATATTTCGAGGTCGGTTAGTCCGAAAGCAAGCGGTTGTTACTCTAAGGTGTATGCAGGCTCTTGTTAGGGTTCAGGCACATGTAAGGGCAAGGAAAGTGAGGAGCTCTCCAGAAGGGAAAGCAGTGCAGAAATTGTTGGATGAACATCGCTGCCTTGCTGATCCTGTTAAGCAGGCTGAGGAAGGATGGTGTCACATTCCTGGGACTGCAGATGAAGTTAAAGCAAAGCTAAGAATGAGGCAGGAAGGAGCCATCAAGAGGGATAGAGCCATGGCATACTCTCTCTCCACACAGTCAAGAGGGTGTGCTAGTCCAAACTCAAGAGCCTCTAAGGCAGAGGCATTGACTCCTTTCAAGCATCAGAACCTAGACAATAAGAGCTTAGGAAGCAGCTTGTTAGAAAACTGGATGGCATCAAAGCCCTGGGAAAGTCCAATCTCCAAGAAAAGTGATGATCACATTGTTCAATCAAGAAGGAATGGTGTCACAACCAGGATTTCAATGAAATCTCTTCCGACAAGTAATTCCACTCCATCGTCTTCGGCGATGAGCTCTGATTGCATGTATGATGATAGCCCTGCATCAACATGCACATCAGAGGAAAGAGGTGTAGTTCATAAGCCTAGTTACATGAATTTGACACAATCAACCAAGGCAAAATTGAAGTCTTGCAGGAGTTCTTCACAGAATTCAAAGGATTCTTATTTGTCTCATAGCATAACACTTGTGAATGGAGATGCTAGAAGCAGTGGTGGTTCTGATGCTTCAGTTAACTTGTGGAAAGGTCTTTGTTCAACACCTCTAAGGGCAAGTTATCAAAGAAGATATGTTAGGAGGTAG 1038 0.4547 MLLLLLLLTSLILLLPSLQPWLHLSELHPKISSSSSMNGLPYAFRHSSELSWRALRALRAVVRLQAIFRGRLVRKQAVVTLRCMQALVRVQAHVRARKVRSSPEGKAVQKLLDEHRCLADPVKQAEEGWCHIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQSRGCASPNSRASKAEALTPFKHQNLDNKSLGSSLLENWMASKPWESPISKKSDDHIVQSRRNGVTTRISMKSLPTSNSTPSSSAMSSDCMYDDSPASTCTSEERGVVHKPSYMNLTQSTKAKLKSCRSSSQNSKDSYLSHSITLVNGDARSSGGSDASVNLWKGLCSTPLRASYQRRYVRR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30951g00002 345 PANTHER IQ-DOMAIN 5-RELATED 50 302 - -
Stsc30951g00002 345 ProSiteProfiles IQ motif profile. 59 86 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30951g00002 Stsc-Chr30951 860 2580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30951g00002 43 329 IQD Protein Family AT1G72670 46.382 1.88e-61 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30951g00002 - - gmx:100816492 364.385