Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30950g00004 ATGAAACCATGGGGGGAGGAAACAGACCAAAAATTGAAAATTAAAGTTGACCACCCAAGAAAAGATGCACAAAAGATGCAGAGTAGCCACCATGGGGAGGAGATTCCCAGAATGGTAATATATCCTGATGAGAAGACCCAGGAAGAAGGGCATGTTAATGGAAGCTTCCACATTGGTGATGAGATGTGTGAAATAGAAGTAGACATGCAAGTAAAGGTTAGTGAGGACAAAACAAACCAGGCTTTATCTATTGAGAATCAAGATGAAACCATGTTAGAGAGTTCAGAAACTATTTCATGCTCAATCTGCAAAAGTAGAAGCACAGGAAATATATGGAAAGAGAAGTTTACTTATGAAGAACTTGAAGGTGCTACAGATGGATTTTCAACCCAGAATTCTCTGTGTGAAGGTGGATGTGGACCTGCTTTCAGAGGTCAGATAGATGAGCTGGAAATAGTTGTTAAGAAATATTTCATGACAAGCTTCCAGGCAGAGAAGGTCATCATGTCGGAAGTTGAGCTGCTCAGAAATGCTAGGCATCAAAATTTGATAGAGTTATTGGGTTCATGCCTACGAGAAAGTCAATTGTTCATTGTATATGAACATGCATGCAATGGTTCCCTTGATCAGCACTTATCCAGAGCAAGTAGCAGATCATTAACATGGACAGAAAGAATGAAAGTCGCAACAGGTGTTGCTAAAGGTCTTAAGTATCTACACGACAATAACATAATTCATGGAAGGATAAAGCCAAGTAACATTCTTCTAGATCATGACTTTAACCCCAAGCTCGCCGAATTTGTGTTCGGAAAAGGAAGTTGTGAAATGAAATACAACTGCAAGGGCAATTGTGGATATAAAGCGCCAGAGTATGAAGAAAAAGGAAACTTAACAGATAAGACAGATGTGTATTCTTTTGGTGTAATTCTTTTAGAGCTGATAACAGGCTCTATGATTACAGAAGAAGAATCAGAACAGAAATATCTTACTGAATGGGCAATCCCACTTCTTAGAGGGAGGAAGTACGCACTGTTGATTGATCCCAATATGAGCAGCCCATTTGATGAACAAGAAGTGGATTTGTTGGTCCAGATAACAGAAAAGTGCCTCCGAAAAAATCCTGAGGAAAGGTTCACTATGAATATGATTGTCTCTGTGCTACAGGGTGATGTTGCTGTTACCGGCGACAGCTATGTCGCGGAAGAGTCCTCCTCATCCAAGAAGTCATGCTTTTTCTTGTGTAGTGCTTCAGATGCAACAAGCTCAAAAGGCAAGAAGGAATTGTCGCCATTAGAGGAAGGTATATGCAAAGAGGTTGTTGAAGAAAGAGAGGACAACATAACTTGCAGTAGAAGCAACAACAAAACAGAGACGAGAGAAGAAGAGAAGGTTATGGAAACACAAAAGAAAGAAAGCTTAGGCGCCAAGGTACATGAATGTAATGGTTGGTGCCTGTCTTATGGTGGAGCCAGACACTATTATCTTCATCAAAAGGCTAAGGAATATACAGCATGCCGAGAATTCTTTATTTTTAGTAATATACTCATTTAA 1551 0.3985 MKPWGEETDQKLKIKVDHPRKDAQKMQSSHHGEEIPRMVIYPDEKTQEEGHVNGSFHIGDEMCEIEVDMQVKVSEDKTNQALSIENQDETMLESSETISCSICKSRSTGNIWKEKFTYEELEGATDGFSTQNSLCEGGCGPAFRGQIDELEIVVKKYFMTSFQAEKVIMSEVELLRNARHQNLIELLGSCLRESQLFIVYEHACNGSLDQHLSRASSRSLTWTERMKVATGVAKGLKYLHDNNIIHGRIKPSNILLDHDFNPKLAEFVFGKGSCEMKYNCKGNCGYKAPEYEEKGNLTDKTDVYSFGVILLELITGSMITEEESEQKYLTEWAIPLLRGRKYALLIDPNMSSPFDEQEVDLLVQITEKCLRKNPEERFTMNMIVSVLQGDVAVTGDSYVAEESSSSKKSCFFLCSASDATSSKGKKELSPLEEGICKEVVEEREDNITCSRSNNKTETREEEKVMETQKKESLGAKVHECNGWCLSYGGARHYYLHQKAKEYTACREFFIFSNILI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30950g00004 516 PANTHER OS01G0253100 PROTEIN 79 391 - -
Stsc30950g00004 516 ProSiteProfiles Protein kinase domain profile. 128 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30950g00004 516 MobiDBLite consensus disorder prediction 1 34 - -
Stsc30950g00004 516 SUPERFAMILY Protein kinase-like (PK-like) 110 387 IPR011009 -
Stsc30950g00004 516 Gene3D Phosphorylase Kinase; domain 1 86 202 - -
Stsc30950g00004 516 Gene3D Transferase(Phosphotransferase) domain 1 204 404 - -
Stsc30950g00004 516 Pfam Protein kinase domain 131 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30950g00004 Stsc-Chr30950 20461 24391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30950g00004 116 387 Trihelix Transcription Factor Family AT5G38560 37.500 1.80e-53 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Stsc30950g00004 Pkinase 3.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30950g00004 - - ahf:112795554 749.969