Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30950g00003 ATGCAAAGCAGGCGCCAACGCCGCAAGGCCATGAACACACAACTCGTGATTAACGGGGAAGACATAAACATTGATGAGGAAACAGGTGAAATAGAAAGAGATAAGCAAAGACAGGAAGATGAAGAGATAAAAAGCATGCTCCATGATAATGAAATGGACACAACAGCTGAGACCAACAATGATCAAATAACAGCTCATGAAATAGCTGAACAGACACAGAACTCATTCCATGTTGAGGGATGGAGCTTAAGGCATCCATCAAACATGTATGAAATGATTGAGATTGATCAACCAAGAGAGACCGAAAGCGCTTCGAAAGAATTGTTATGCTCTGTCTGCAAAATCAGACGGCCTCATAACGAATGGAAAAAGGAATTCATGTATGAAGAGCTCCAAAGTGCCACAGATGGATTCTCATTGAAGAACTGTCTCTCTGAAGGTGGATACTTGTCTACTTTCAAAGGCCAGCTAAAGGGAGAGTTGAAAATAGTAGTTAAGCAGCATGAGATAAGAAGTTCTCAAGAAAGGGAAAGGATCCAATCCGAAGTCCAATCCACTCTCAAAGTTAGACATAAGAATGTGGTCTTGCTGTTGGGTTTAACAACACAAGAAAGCTTCCTATTGACCGTGTCGGAGTATGCATGCAACGGTTCACTCGATATGTATCTATCGAAGGAAAGCAGCAGATCATTGACCTGGAGAGAAAGGAAGAAAGTGGCGATAGGTCTCGCGAGAGGTCTAAAGTACCTTCATGAGAATAGCATAATCCATGGCAATGTAAAATCAAGTAACATTCTTCTGACACATGAATTCAACCCACTGATTGGAGATTTCGGATTTGGTAAAAAGGATGACTTCAAGAAGTTATGCAAAGATAAAAGTGTAGCGAATTGTGAGTACATAGCACCGGAGCTTCAGGAGAGGGGAAAACTATCAACTAAGTCTGATGTGTACTCCTTCGGAGTGGTTCTGCTAGAGCTGATCACCGGACGCAGGGTTAAAGGTCACTCAGCAGATAAAAGCCTTATTGGATGGGCCAAGCCTCTTCTTAAGGGAAAGCTGTATGCACAACTTGTAGATCCCACTCTCAGCAAGTCATATGAAGAGGAGAAACTTCAATGCCTGGTCCAAGTAATAGATCAATGTCTAAAGAAGAGTCCAAAGGACAGAATGTCCATGAATGTGATTGTTTCTGCATTGCAAGACTTGGAAGATAGGGAACAGCAATACATCATAGAAGAACTTACTCCAGGTCCAACAGAAAATAACCAACCAAGCCAAGAACCAGAGAAGCCGGAGAGCCGGTCCTACATTGAACAAGGAAGGTTGAAACTAGTAGTTGAAAATAACAACTTCTACAAAACAAGCCAAGGAAACTCTGATCACCTGAACCACGTTGAAGAACAGATGGAAAGCAAGTCTGTAGGAGAGGAAAGGAGTTCTCTAAAGATGAAAAATTACGATCAGACGGTCGTTGATCAGCTGAATCAGTATGAAAAACAAGTGAATAGCAACCTCTATGGGCATGGCATCTCAACAGAGAATCACATAATAGGACAGACCATAGCTGACCAGCCAAGAAATGATCAAGTGGAACAGCAGTGGTGCTCATCCGAAATTGAAATCAAAGATGACCGGCCAATCCAAAATAGAAGACAATGGCAGAGCAGCTCAAGTGAGAGTTTATTTGCTGCATATCAAAGTGAAGCCATTCTGGAGAACTCGAAATCGTCTAAATGCTCTATTTGCAAAAGTAAACGCCCAAATATTTCATGGCAAAGGGATTTTACTTATGATGAACTTCTGGAAGCTACAGAAGGATTTTCAGCTAAGAACTCTCTATCTGAGAGTAAAGATGGGCCTACTTTCAATGGATTGCTAGAGAGCAAGATAAAAATAGTTGTCAAGAAATATCAAATCACTAAGCCTCAGGAAGAGAAGATTTTCAGTATAAAGTCAAGTAACATTCTACTAACACATGACTTTGTTCCACTGATTGGAGATTTCGGCTTTGCAAAAGTGAGGCTTGATACAAAGAAATCATACAAGGGTAAGGATGCAAGTAATTTGGGATATGCAGCACCAGAATTCGTAGACAGTGGGAAAGCATCAACCAAGGCAGATGTATACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCAGCGGCCGAAAGGCTACTGACAAAGTACCGGGAGGCAAAAGCTTAGTAGGATGGGCAAGACCCCTACTGGGAGGAAGAAAGTACCCGCAGTTGGTGGATCCAAATATCATCAACTTCTATGATGAAGAAGAATTAAAATGGCTGGTCCAAGTAACAGAACAATGTCTTAGAAAGAATCCGAAGGATAGATCTTCAATGAATATGGTAAGTCTAAGTGAGATGTAG 2385 0.4147 MQSRRQRRKAMNTQLVINGEDINIDEETGEIERDKQRQEDEEIKSMLHDNEMDTTAETNNDQITAHEIAEQTQNSFHVEGWSLRHPSNMYEMIEIDQPRETESASKELLCSVCKIRRPHNEWKKEFMYEELQSATDGFSLKNCLSEGGYLSTFKGQLKGELKIVVKQHEIRSSQERERIQSEVQSTLKVRHKNVVLLLGLTTQESFLLTVSEYACNGSLDMYLSKESSRSLTWRERKKVAIGLARGLKYLHENSIIHGNVKSSNILLTHEFNPLIGDFGFGKKDDFKKLCKDKSVANCEYIAPELQERGKLSTKSDVYSFGVVLLELITGRRVKGHSADKSLIGWAKPLLKGKLYAQLVDPTLSKSYEEEKLQCLVQVIDQCLKKSPKDRMSMNVIVSALQDLEDREQQYIIEELTPGPTENNQPSQEPEKPESRSYIEQGRLKLVVENNNFYKTSQGNSDHLNHVEEQMESKSVGEERSSLKMKNYDQTVVDQLNQYEKQVNSNLYGHGISTENHIIGQTIADQPRNDQVEQQWCSSEIEIKDDRPIQNRRQWQSSSSESLFAAYQSEAILENSKSSKCSICKSKRPNISWQRDFTYDELLEATEGFSAKNSLSESKDGPTFNGLLESKIKIVVKKYQITKPQEEKIFSIKSSNILLTHDFVPLIGDFGFAKVRLDTKKSYKGKDASNLGYAAPEFVDSGKASTKADVYSFGVVLLELISGRKATDKVPGGKSLVGWARPLLGGRKYPQLVDPNIINFYDEEELKWLVQVTEQCLRKNPKDRSSMNMVSLSEM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30950g00003 794 MobiDBLite consensus disorder prediction 415 431 - -
Stsc30950g00003 794 Gene3D Transferase(Phosphotransferase) domain 1 649 794 - -
Stsc30950g00003 794 Gene3D Transferase(Phosphotransferase) domain 1 215 417 - -
Stsc30950g00003 794 Pfam Protein tyrosine and serine/threonine kinase 140 400 IPR001245 GO:0004672|GO:0006468
Stsc30950g00003 794 SUPERFAMILY Protein kinase-like (PK-like) 651 789 IPR011009 -
Stsc30950g00003 794 ProSiteProfiles Protein kinase domain profile. 138 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30950g00003 794 FunFam Lectin-domain containing receptor kinase A4.3 214 414 - -
Stsc30950g00003 794 PANTHER OS01G0253100 PROTEIN 78 408 - -
Stsc30950g00003 794 Pfam Protein kinase domain 651 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30950g00003 794 SUPERFAMILY Protein kinase-like (PK-like) 122 407 IPR011009 -
Stsc30950g00003 794 Gene3D Phosphorylase Kinase; domain 1 112 213 - -
Stsc30950g00003 794 MobiDBLite consensus disorder prediction 414 436 - -
Stsc30950g00003 794 ProSiteProfiles Protein kinase domain profile. 496 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30950g00003 Stsc-Chr30950 14961 18747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30950g00003 651 789 Trihelix Transcription Factor Family AT5G38560 44.218 2.17e-26 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Stsc30950g00003 PK_Tyr_Ser-Thr 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30950g00003 - - ahf:112795554 1025.39