Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30946g00002 ATGACTGGCAGAGAAATCCTTCACAAGATGAAGTGCTTTCAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGCACATAACTCATGGCTTCCATTTGGTAAAGGGAAGATCAGATCATGCAATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTTGAAGATCATGAGTTGGGTTTGTTTGCAATATTTGATGGTCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATCTGTTTGATAACATCATAAATGAGCCTGACTTCTGGACTGACCCTGCTAATGCTGTGAAGAGGGCCTATAGTGTAACTGATTCTACTATTTTGGAGAAATCAGGTGAATTGGGCAGAGGGGGTTCAACTGCTGTCACAGCAATATTGATCAATTGTCAGAAGCTAATAGTGGCTAACATTGGGGACTCTCGGGCTGTCTTATCCGTGAATGGCGAGGCCAAACAACTATCGGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTTGTATCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAGCACTTAAGCTCTGATCCATATGTGACAGTGGAACTCATAGGTGATGGCGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTCAGATTTCATATACCATTTTATGATTTTTTCTCCCCATTAATTGCTTTTTAA 774 0.4251 MTGREILHKMKCFQEKVLGSSDPDSGKGKSKMSKHITHGFHLVKGRSDHAMEDYLVAQFKQVEDHELGLFAIFDGHSGHSVPDYLRSHLFDNIINEPDFWTDPANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGEAKQLSVDHEPNTEWEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVRFHIPFYDFFSPLIAF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30946g00002 257 SUPERFAMILY PP2C-like 33 244 IPR036457 -
Stsc30946g00002 257 PANTHER PROTEIN PHOSPHATASE 32 241 IPR015655 GO:0004722|GO:0006470
Stsc30946g00002 257 SMART PP2C_4 32 256 IPR001932 -
Stsc30946g00002 257 ProSiteProfiles PPM-type phosphatase domain profile. 37 257 IPR001932 -
Stsc30946g00002 257 CDD PP2Cc 38 241 IPR001932 -
Stsc30946g00002 257 Gene3D - 20 244 IPR036457 -
Stsc30946g00002 257 FunFam Probable protein phosphatase 2C 39 27 245 - -
Stsc30946g00002 257 Pfam Protein phosphatase 2C 48 241 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30946g00002 Stsc-Chr30946 4884 9085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30946g00002 1 241 PP2C-type Phosphatase Gene Family AT3G15260 74.286 1.10e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30946g00002 K17506 - gmx:100787942 407.142