Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30942g00002 ATGGAATCTTCTCATATTAGCTCTCTACGATTTTGGTATCTTCTCATTCCTCTACTCTTTGCCTTCATCACACAAATATTTCTCAAACTTCTCAAACAACAAATATCTTCAAAATCAAAACAAACCACATCACTACTACCTCCGGGACCAAAACCATGGCCTATAGTTGGTAACCTACCCGAAATGCTAGCAAACAAACCAACATCTCAATGGATACATAACATCATGAGTGACTTAAACACCGAAATCGCATGCATTCGTCTAGGTAACATTCATGTCATTCCGATAACTAGCCCTGAAATCGCTTGCGAATTATTGACAAAACAAGATTTGATATTCGCGTCGAGGCCTAGGAATTGGTCGAGCGAACATGTCTCCGGCGGGTTCTTGAGCAAACTACTAGTGCCCTATGGAGAACAATGGAAGAAAATGAAGAAAGTCATGACCAATGAGTTGTTATCCCCAAGAAGACTTCAATGGCTACAACACAAGAGGGTGGAGGAAGCCAACAACATTGTTCGTTATATTTACAATCAATGCAAAAATAATAATGGTGGTGGTCTTGTGGATGTGAGGTTAACTGCACGACATTATTCAGGGAACATCGTTAGAAGGTTGGTTTTCAATACAAGGTATTTTGGTGAAGTAAGAGAAGATGGAGGACCCGGTTTTGAGGAAGTGGAACATATAGATGCAATTTTCACTTGCTTGAGATACCTCTTTGCATTCTCTATCTCTGATTACGTTGCATGCTTGAGAGAGCTTGACTTGGATGGTCACAAGAAGAACTTGAAGAATGCCACTAAGTTGATATTGAAGTATCATGATCCCTTAATCCAAGATAGGGTTCATCAATGGAGGAATGGCAATAGGACACATGAAGAGGACTTGCTTGACGTTTTAATCTCACTCAAAGATTCAAATGATAATCCACTTTTGACGGTTAACGAAATCAAGTCTCAAATTATGGATATGATGATTGCAACTGTGGACAATCCATCAAATGCATTTGAATGGGGACTTGCCGAGATGCTAAACCAACCGGAGACACTTCGAAAGGCAACGGAGGAATTAGATAGCGTGGTTGGCAAGGAAAGACAAGTGCAAGAATCAGACATTCCAAAACTCAATTACATTAAAGCATGTGCAAGAGAAGCATTTCGTCTTCACCCGGTTGATGACATCAACCCTGACCATGTTTCCATGGAGGATACATTTGTTGCCAACAAAACCTACTTCATTCCAAAGGGTAGTCGTGTCATTCTTAGGCGGCAAGGAATCGGACAGAATCCAAGAATATGGGAAGAACCGTTGAAGTTCAAACCCGAACGCCATTTGGAAATGGAAAACAATAAAGATGTTGGGTTTAAGAATTTGAGTTTGAATGAGCCGAGCTTGAAGTTGATTTCCTTTAGTACCGGAAGACGAGGGTGTCCCGGGATCATGCTTGGGTCTACCATGACGATTATGTTGTTTGCTAGGATGTTGCATGGCTTCAATTGGAGTGTGCCACCAAATGAGACAACCATTGAACTCTCCGAATTGGAAGGATATACCATGAAAGCAAAGCCACTCATGGCATATGCAACGCCTCGTTTACCAGCGGAGGTTTATCATATTGTTTGA 1626 0.4121 MESSHISSLRFWYLLIPLLFAFITQIFLKLLKQQISSKSKQTTSLLPPGPKPWPIVGNLPEMLANKPTSQWIHNIMSDLNTEIACIRLGNIHVIPITSPEIACELLTKQDLIFASRPRNWSSEHVSGGFLSKLLVPYGEQWKKMKKVMTNELLSPRRLQWLQHKRVEEANNIVRYIYNQCKNNNGGGLVDVRLTARHYSGNIVRRLVFNTRYFGEVREDGGPGFEEVEHIDAIFTCLRYLFAFSISDYVACLRELDLDGHKKNLKNATKLILKYHDPLIQDRVHQWRNGNRTHEEDLLDVLISLKDSNDNPLLTVNEIKSQIMDMMIATVDNPSNAFEWGLAEMLNQPETLRKATEELDSVVGKERQVQESDIPKLNYIKACAREAFRLHPVDDINPDHVSMEDTFVANKTYFIPKGSRVILRRQGIGQNPRIWEEPLKFKPERHLEMENNKDVGFKNLSLNEPSLKLISFSTGRRGCPGIMLGSTMTIMLFARMLHGFNWSVPPNETTIELSELEGYTMKAKPLMAYATPRLPAEVYHIV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30942g00002 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Stsc30942g00002 541 Gene3D Cytochrome P450 39 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 SUPERFAMILY Cytochrome P450 47 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 FunFam Cytochrome P450 9 38 536 - -
Stsc30942g00002 541 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 540 - -
Stsc30942g00002 541 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30942g00002 541 Pfam Cytochrome P450 47 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30942g00002 Stsc-Chr30942 9213 11807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30942g00002 19 538 Cytochrome P450 AT5G05260 51.128 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30942g00002 - K12153 gmx:100809902 675.626