Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30940g00003 ATGGCGAATGGAGAGAGTGTTGGGGTAGTGGCAGCAATCTTCAGTGAGGATGAACTGAGTGAGGTGAGTGGCGTGAAGCGAGTTGCTGATTATGTTGAGGTCACGTGCGGTTGTACTAGCCATCGGTATGGCGATGCTGTTGGAAGGCTTAGGGTTTTCCTTAATGGCTACCTTGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGAGTCCTTCTGCATTTGAGAAACACTCTGGAAGAGAGACAGCTAGAAAGTGGAAGAACAACATATGGGTAATAGTGAAGGGTGAGAAGGTTCCATTGTTCAAAACAGTGCTACTCAAATACTACAACCAAGTTTCAAAAGCTGCAGCCCTTAAATCCCAAAGTGGAAGGTCACACCGTGATGAGTTTGTTCGGTGCACAATTTGCAACAAAGGGCGCAGGTTCCGTCTCAGGAGTAAAGAGGAATGCCGAATTCACCATGATGCTTTGGCAGATGCTAATTGGAAATGTTCTGATCTCAAATATGACAAAATTACATGTGAAGATGAAGAAGAACGAGCGAGCCGCAGAGTATACAGGGGATGCACTCGCTCTCCGACATGCCAAGGTTGCACCTCCTGCGTCTGCTTCGGCTGCAGCATCTGCCGTTTTTCGGATTGCAGCTGCCAGACTTGTACTGACTTCACAAGCAATGCTAAAGTTTGA 702 0.4701 MANGESVGVVAAIFSEDELSEVSGVKRVADYVEVTCGCTSHRYGDAVGRLRVFLNGYLEITCECTPGCQEDKLSPSAFEKHSGRETARKWKNNIWVIVKGEKVPLFKTVLLKYYNQVSKAAALKSQSGRSHRDEFVRCTICNKGRRFRLRSKEECRIHHDALADANWKCSDLKYDKITCEDEEERASRRVYRGCTRSPTCQGCTSCVCFGCSICRFSDCSCQTCTDFTSNAKV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30940g00003 233 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Stsc30940g00003 233 PANTHER PROTEIN ULTRAPETALA 1 12 232 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30940g00003 Stsc-Chr30940 14079 17640 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Stsc30940g00003 SAND 0.00015 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30940g00003 - - gmx:100796203 424.476