Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30925g00003 ATGTATGAATTTGTTATATTGGTTTTGATGGTTGTGGTGGCCGTAGCGACCGGAGAGAGAGGAGAATGTCCAGCTTCATTCGATTGTGGAGACAATATTGGGAACATCAGCTTCCCTCTGACAACAGCAGAGAGGCAGGAGTGTGGGCTTTTGGCCATATACAATTGTTCTGAGCCACCTCAGGTCCAAAGATGGATTCAGCTAAGGGATAGAGGCAAACAATATGAAGTTATACGTGTATTTCAACAGGGTTATACTAGTATTCAGTTCAGAGACAATGATTTATACAATCTTCTTCAATCTAGAAATTGTAATGCCTTCAGATATAACTATACTCTTTCTCCTCCTTCCACCTTTCATGGTTTTGCTTCCCTTAGCATCGAATACAACACAACCATCTTTAGATGCAACCGTACCCTCCATGTCCCCCAAACTAAATTTATGTCCAAATATACAAATTGCACTGACATGGATCTCTACTACGGCTATCCCATGCACGCTCCACAAATTCAAAGTTCTTTGGCGGCATGTACAAAGGTCCTGGTTCCAATCAAAGACGTTCCTGATGGAAACGATCCGTTCACATTTGTAAATGCTGATATCGAGGCTAAGGTCCTTGTGTCGCAAGAATGCACAGACTGTCACAATAAGCAAAGAGGCCACTGTCAACTTTACAGCAATAGCAAATTTTATTGTGCCAACGTTCGGCCGCAGGAAAACACAAGCACAAGGAAACACGTTCTGAGTAAGAAGGCTAAACTGGGTTTAGGTTTGGGTATTGGCTTCTTAGGCATCTTCATAATTGGGTTGCTCTTGCTCCTCTTCCTAATCTACAACAGAAAACGTGGCTCCTCAAGCAGCAACTTTGAATCAAGATACTCTTATTCCGAGTCCTCTTCCAATCCACACCTAGATAATGGCATTGCTTACCTCGGAGTTCCACTCTTCTCCTACAAGGATCTTAAAGAAGCAACAAACAATTTTGACCATACCAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTATGGCAAACTCCAAGATGGAAGAGAAGTTGCCGTGAAGCGCTTGTATGAGCACAACTACAGGCGAGTAGAGCAATTCATAAATGAAGTTCAGATCCTAACACGTTTGAGGCATAAAAATCTTGTGTCCCTCTATGGCTGCACTTCGCGCCACAGCCGCGAACTGCTACTTGTATATGAATTCATTTCTAATGGCACGGTTGCTTGTCATATCCACGGCGAATTAGCCAAGCGCAGCTTACTACCTTGGGCTACAAGAATCAAAATCGCCATAGAGACTGCTACTGCATTGGCTTATCTTCATGCTTCAGACATCATTCACCGCGATGTGAAGACCAACAACATTCTTCTTGATCACAACTTTACTGTCAAGGTTGCTGATTTTGGCCTTTCAAGACTATTCCCCATTGACGCCACCCACGTCTCCACCGCGCCACAAGGGACCCCTGGCTATGTTGACCCTGAATACCACCAGAATTACCAGCTTACTAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTTCTTATTGAGTTAATATCATCCATGCCTGCAGTTGATATGAACAGGGATAAGGATGAGATTAACTTATCAAATCTAGCCATAAAGAAGATTCAAAGTAGTGCAATTAGTGACTTGGTTGATGGTTCTCTTGGTTTTGATTCAGACAAGGAGGTAAGGAGAATGACAGTTTCGGTAGCGGAATTGGCTTTCCAGTGTTTGCAAAGAGACAAGGAGTTGAGACCTTCCATGGATGAAGTGTTGGATGAACTAAAGAAGATTGAGAGTGGGAAGGATGAGGCTGATGGTATTGAAGTTTCTGAAAATAAGATTGTACATCAAGCACCACCAGCTTCACCTGAATGGGATGAAGTTGGATTATTGAAGAATATGAAGATACCACTACCTTCTTCACCAATCACTGTCACTGATAACTGGGAAAGTAAATGCACCACGCCCAACATCAGTGCTTAG 2001 0.4298 MYEFVILVLMVVVAVATGERGECPASFDCGDNIGNISFPLTTAERQECGLLAIYNCSEPPQVQRWIQLRDRGKQYEVIRVFQQGYTSIQFRDNDLYNLLQSRNCNAFRYNYTLSPPSTFHGFASLSIEYNTTIFRCNRTLHVPQTKFMSKYTNCTDMDLYYGYPMHAPQIQSSLAACTKVLVPIKDVPDGNDPFTFVNADIEAKVLVSQECTDCHNKQRGHCQLYSNSKFYCANVRPQENTSTRKHVLSKKAKLGLGLGIGFLGIFIIGLLLLLFLIYNRKRGSSSSNFESRYSYSESSSNPHLDNGIAYLGVPLFSYKDLKEATNNFDHTKELGDGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFINEVQILTRLRHKNLVSLYGCTSRHSRELLLVYEFISNGTVACHIHGELAKRSLLPWATRIKIAIETATALAYLHASDIIHRDVKTNNILLDHNFTVKVADFGLSRLFPIDATHVSTAPQGTPGYVDPEYHQNYQLTSKSDVYSFGVVLIELISSMPAVDMNRDKDEINLSNLAIKKIQSSAISDLVDGSLGFDSDKEVRRMTVSVAELAFQCLQRDKELRPSMDEVLDELKKIESGKDEADGIEVSENKIVHQAPPASPEWDEVGLLKNMKIPLPSSPITVTDNWESKCTTPNISA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30925g00003 666 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
Stsc30925g00003 666 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Stsc30925g00003 666 SUPERFAMILY Protein kinase-like (PK-like) 313 604 IPR011009 -
Stsc30925g00003 666 Gene3D Phosphorylase Kinase; domain 1 301 404 - -
Stsc30925g00003 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Stsc30925g00003 666 FunFam Wall-associated receptor kinase-like 20 405 612 - -
Stsc30925g00003 666 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 660 IPR044652 GO:0004672
Stsc30925g00003 666 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 300 404 - -
Stsc30925g00003 666 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30925g00003 666 Pfam Protein kinase domain 330 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30925g00003 666 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30925g00003 Stsc-Chr30925 13281 16139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30925g00003 27 666 Receptor kinase-like Gene Family AT1G25390 48.615 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc30925g00003 Pkinase 7.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30925g00003 - - ahf:112712053 1043.49