Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30894g00004 ATGGTGCTCAAAACCGAACTCTGCCGTTTCAGTGGCCAGAAGATCTACCCTGGCAAAGGCATCAGATTCGTCCGAGGCGATTCACAGGTCTTTCTGTTTGCCAACTCCAAGTGCAAGAGGTACTTCCACAACAGATTGAAGCCATCAAAGCTTACATGGACTGCCATGTATAGGAAGCAACATAAGAAGGACATTGCACAAGAAGCTGTGAAGAAGAAGCGTCGGGCCACCAAGAGGCCTTACTCCAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAGGAGGACTGAGAAGCCTGAGGTTCGAGATGCTGCCAGAGAAGCTGCTCTTCGTGAAATCAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAACCGCGAAGTCCCAAAAGTCACAAGGCAAAGCTAACGTTTCCAGGGGTGCTCAACCTAAAGGCCCTAAGCTCGGCGGTGGAGGCGGCAAGCGCTGA 492 0.502 MVLKTELCRFSGQKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKKRRATKRPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAETAKSQKSQGKANVSRGAQPKGPKLGGGGGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30894g00004 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Stsc30894g00004 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Stsc30894g00004 163 FunFam 60S ribosomal protein L24 3 64 - -
Stsc30894g00004 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Stsc30894g00004 163 Gene3D - 69 139 - -
Stsc30894g00004 163 SMART 4TRASH 8 46 IPR011017 -
Stsc30894g00004 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Stsc30894g00004 163 PANTHER 60S RIBOSOMAL PROTEIN L24 4 157 IPR000988 -
Stsc30894g00004 163 Coils Coil 112 132 - -
Stsc30894g00004 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Stsc30894g00004 163 MobiDBLite consensus disorder prediction 115 136 - -
Stsc30894g00004 163 MobiDBLite consensus disorder prediction 115 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30894g00004 Stsc-Chr30894 11314 13022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30894g00004 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.439 1.05e-84 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30894g00004 K02896 - gmx:100791767 238.424