Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30890g00001 ATGGATATCATGGTTGATGACACTGCGTCACTTAGTGCCAACCGTGTGCAAGGATATTGTTTTACACCGTCCCCTGTTATTACCAACAGAGGTAATGATAATCAAGGAGAAAAGATTGGCATTGCTATTACATGGGAGAATTTGGAGGTCACTGTCACAAATGGAAAGGAAGGAAAGCAAATCCTGCATGGCCTCACAGGTTATGCACAGCCAGGAAAGCTTTTGGCCTTAATGGGACCTTCAGGATGTGGCAAATCTACACTTCTTGATGCCTTATCAGGAAGATTGAGTACAAACATGAAGCGAAAAGGGAAGATTCTAATCAATGGCCACAAACAATCATTGGCTTATGGAACTTCAGGGTATGTGACACAAGAAGATGCTATGCTATCAACCTTAACAGCTGGGGAAACTTTATACTACTCAGCTCAGCTCCAATTTCCAGATTCCATGTCAGCAGCAGAGAAGAAGGAAAGAGCTGATATCACATTAAGGGAGATGGGCCTGCAAGATGCCATTAACACAAGAGTTGGAGGATGGGGTGCAAAAGGCCTAAGTGGGGGACAAAAGAGGAGACTCAGCATTTGCATTGAGATCCTAACTCGCCCTAGGCTTCTGTTTCTTGATGAACCAACAAGTGGTCTTGATAGTGCAGCCTCCTATTATGTCATGAGTGGAATTGCACATCTTAGTCAAAGAGATGGAATTCAGAGGACTATAGTCACATCCATTCATCAACCTAGCAGTGAAGTTTTTGATCTGTTTCATGACTTGTGTCTTTTGTCTTCTGGTGAAACAGTATATTTTGGTCCTGCCTCTGATGCTAATCAGTTTTTTGCTTCAAATGGCTTCCCTTGTCCAATTCTCCACAATCCGTCTGACCATTTCTTAAGGATCATAAACAAAGATTTTAATGAGGATATTGAACAAGGTTTTGGTAAAGGAGTGACAACAGAAGAAGCAATTGATATCCTTGTTAAGTCTTATAAATCGTCCAAAATTAGAGATGAAGTTCTATATGAAGTGGCAAAAATAAGTGAAAGCGGCAGAGGATCAATGCTTGGCTTTACTCTAAATGTTCTGGCTTTCCTGACACTTGTTGGTGGACTCTCCCCACTGATAGAGGAAATGAAGGTATTTGAAAGAGAGAGATTGAATGGGCACTATGGTGTTTCTGCATTCCTGATAGGGAACATATTATCAGCAGTACCATTCATGCTAGTAACATCTCTGATTCCAGGAGGAATAATCTACTACCTAGCAGGGATGCACAAAGGAGTACAACACTTTGTGTACTTCATATTCGTTCTATTTGGAATAGTGATGTGGGTTGAGAGCCTGATGATGGTTATAGGGAGCATCCTCTCCAACTTCCTAATGGGAATAGTGGTTGCAAGTGCAGTTGAAGGGCTGAGTATCTTGACATGTGGATTCTATAGGCTGCCCAATGATCTTCCAAACCCAGTTTGGAAGTACCCTCTCTACTATGTCTCGTTTCTCACGTATGCATTGCAAGGATTGTTCAAGAATGAATTTGAAGGGTTAACGTTTGTTGTGGGTGAAGAAGGCAGCACTAGAAGTATAATTAGTGGCAGAGACATTTTGACAAACACATGGCAGGTGGAGATGAAAAGGTCAAAATGGGTTGACCTTGCAATCATGTTTGGAATGATTGTTGTGTACAGAGTTGTGTTCTTGGGAATTACCAAGAGCAAGGAGAAGCTGAAGCCTGTTGTTGCATCCATTAAGTGTTCTTCCCAAACAAAAGTTTTCGCCACAGGTTCTGCAATCAGAATCAGTGGCCAGTCAGATACTGTATAG 1821 0.4179 MDIMVDDTASLSANRVQGYCFTPSPVITNRGNDNQGEKIGIAITWENLEVTVTNGKEGKQILHGLTGYAQPGKLLALMGPSGCGKSTLLDALSGRLSTNMKRKGKILINGHKQSLAYGTSGYVTQEDAMLSTLTAGETLYYSAQLQFPDSMSAAEKKERADITLREMGLQDAINTRVGGWGAKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSGIAHLSQRDGIQRTIVTSIHQPSSEVFDLFHDLCLLSSGETVYFGPASDANQFFASNGFPCPILHNPSDHFLRIINKDFNEDIEQGFGKGVTTEEAIDILVKSYKSSKIRDEVLYEVAKISESGRGSMLGFTLNVLAFLTLVGGLSPLIEEMKVFERERLNGHYGVSAFLIGNILSAVPFMLVTSLIPGGIIYYLAGMHKGVQHFVYFIFVLFGIVMWVESLMMVIGSILSNFLMGIVVASAVEGLSILTCGFYRLPNDLPNPVWKYPLYYVSFLTYALQGLFKNEFEGLTFVVGEEGSTRSIISGRDILTNTWQVEMKRSKWVDLAIMFGMIVVYRVVFLGITKSKEKLKPVVASIKCSSQTKVFATGSAIRISGQSDTV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30890g00001 606 Gene3D - 41 282 IPR027417 -
Stsc30890g00001 606 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 347 - -
Stsc30890g00001 606 FunFam ABC transporter G family member 11 41 328 - -
Stsc30890g00001 606 Pfam ABC-2 type transporter 245 301 IPR043926 GO:0140359
Stsc30890g00001 606 Pfam ABC transporter 63 213 IPR003439 GO:0005524
Stsc30890g00001 606 CDD ABCG_EPDR 40 270 - -
Stsc30890g00001 606 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 288 IPR003439 GO:0005524
Stsc30890g00001 606 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 278 IPR027417 -
Stsc30890g00001 606 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Stsc30890g00001 606 Pfam ABC-2 type transporter 351 512 IPR013525 GO:0016020|GO:0140359
Stsc30890g00001 606 SMART AAA_5 71 260 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30890g00001 Stsc-Chr30890 3275 6419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30890g00001 60 249 Calmodulin-binding Proteins AT2G36910 31.818 7.11e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30890g00001 K05681 - cave:132176980 693.345