Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30873g00004 ATGTCTGGAAAGAGTAGGTCACCAGCCATTGTTATCGCATACTTAATGAAGTCGAAAGGATGGAGACTCGCACAAAGTTATCAATGGGTCAAGGAACGGCGACCGTCCGTGGAATTAATAGAAGCTGTCTACCAGCAACTGCAGGAGTTTGAGAACAAGTTGTTCGGATCCATCGATGGTGGTAACTCTGTTCTGGCCGGCGGTTTCCCCTCTGCAGGTCCGATCAACTTTGGATTCCCAAAGATCAGCGAATCAGCTCCATCACTCCCCGCCTTCACCGCTCCTGGAACTACTTCAATATTCACCCGATCACCCTTGGATATAGCTCCTGGCGAGTTCAAGTTCGGAGCTGGCCAGACACAGAACGGTGTCACTGGAATCCCATTCAATGCAAATCCACCAAATCCAAATGGCACTGATATCCAGATGGATGGTTCTTGA 441 0.4921 MSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELIEAVYQQLQEFENKLFGSIDGGNSVLAGGFPSAGPINFGFPKISESAPSLPAFTAPGTTSIFTRSPLDIAPGEFKFGAGQTQNGVTGIPFNANPPNPNGTDIQMDGS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30873g00004 146 MobiDBLite consensus disorder prediction 124 146 - -
Stsc30873g00004 146 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 55 IPR029021 -
Stsc30873g00004 146 Pfam Dual specificity phosphatase, catalytic domain 2 52 IPR000340 GO:0008138|GO:0016311
Stsc30873g00004 146 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 146 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Stsc30873g00004 146 Gene3D Protein tyrosine phosphatase superfamily 1 59 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30873g00004 Stsc-Chr30873 24153 25433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30873g00004 1 39 Protein tyrosine phosphatase (PTP) family AT2G04550 76.923 6.86e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30873g00004 K04459 - gmx:100808721 217.238