Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30844g00004 ATGGCTGACTCTTGCCCTGTGGACTGCATTAACATGCCACTTAAGCTGGAGAAGTCTTCTTCAGGAGCCATGAAATCAAAGGCTCAGAAAGTTGGAAACTTGCCGGCACTAAGGAGATTTCAAAATGAGACATTGCCTCCAAAGTCAGCTAAACCGATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAACCCTGGTTATGTTCAACCTAGGAATGTGGCTCAGATAATGGATGCGGCTACTAAGATAATTGAGGCAAGTCCTCTGCAATATGCAAGGAATGGAATGTCTTCAGTTGGGCCTTCATCTGTTCCCTTGAGAATTCTTGATCTGAAAGAGCAATTGGAAGGGGCACATTATGAATCCAAGCTTGTCAATCGGCACATTGCTAACCCTGTGAATGGTAAGCCTAATGAGAAGAGCAGTTTGTATAAAGGAACTCTAACATTCAAGCGTTTAGGGGATTCAGAAAAGAACAGTTCTAGTTATTTAGGAATTAAAGGAAAATCTGCTTCAGTTGCAATACCATCCAAAGCCGATGTTCAGAGCCGAGATACATCAACTTTGAAAGGTAAAAAGAGACATATTAACCTGAAAGAAGACAATAAGACAAAACCAAACCAGCCATCCCGGAGCCAGAAGAAGCAACTTACAAACCCAGCCCGACCCATTCCACAGAGGGCTTTCACAGGCCAGAAAAACAATGTTCTTGGGCAGAATAACCAAAAGCAGAATAACATAACCCATAAAGGCAAATTGACTTCAAAAAGGGAGTCCAACAAGCCGACAACACAAACTTGCTCTTCAGAAAGCTCTACTTCATCACGGAAGTCAGCGAATAAGGGTGCTGTAAATGGCAATACTGAGCCCAATAGGTCAAATACAAGGGTAATTGATTCTCGAAAGGAGTCTACAGTGTCAAAAAGGCGGAGTATTTCTGAAAAGAAGAAGTATATTAGTGCGGTTGTTCACAATGACACAAGAGGTACTGAAAATGTAGTTGATAATTATGAGAACAAGTTCATAAAATGCAATATTACAACTGATAGAAGTACCGACCAGAATGCAGTTAGCATGGGTGAAAGCAAGGATGTGATTTCGTTTACATTTACATCTCCCTTGGGGAGAACCATGCCTGAGTCACAGCCCTCGACCGCAGGAACAAGCAACAGAGTTCATGCCAATACTCATGCTTGTTATCCCAAGAAGTTATCATCATCTACACTCGTGTTGGACACTGACACAATAGATGGTGATACTTTAAGTGTCCTTTTGGAGAAAATGCTTCAAGAATTGCCATCTAGAATTAACTCACCACAATGTACTCTGATCTCAGATGAGTCTTCTTCTGGAAGCTGTAATATGCAGGACAATGGTTGTGCTTCAAGTGAAAATCGAGTGCTTACCATGAATCAGCAGTTGCAGACAGCAGATCCAATGGAAGATCCTAGCTGTTGCAGCAGTGAAAGTGGGAACGATATAGGTTCTCAGCATTCAAGAGCTGTTAAGCTTTTTGAAAATCCTGCTGCCGTCGAAAGTTACTTGGATTGTGAATATAGTATATTTGGAAGCACGCTTTATCCTTCCATACAAGATGAAGAAGTATCTAACTTTTCTTCAATAAATGACTCTGCATCAATTCAAAATGGGGTAGCATGGTCCGAGCAAAGCTCGGAGGTTACAGAAGGAAGTGCGTCCATCAAACAATTCAGTGGAATATCAAATGGGATAGATTTTAGGAGATCAACAAGGGCCATGGAACTCGGATACATAAAGGACTTGCTTAGTGCAGAGCTTCTGGCAGAAGAATTTGTAATTGGTGAAACAAACAAGGTCATAATGCCAAACCTGTTTGATATATTGGAGATTCAGAATGCTGAGAGCTACATAGAGTACTCTAAGCTTGAGAGAAAGGTTTTATTCGACACCGTGAGCGACTGCTTAGAACTAAGATACAGAAAAGCTTTTGTTGGAAGCTGCAAAGCATGGCCTGAATTGGTGGCATCACTGGAGAAAAGGAACTTGTTGGCAGAAGAATTATTAAAAGAGATAATGAGTTTTAGAAGCATGGAAGAGGTAGTAATGGTTGATGAAGTTGTGCATAAGGACATGAGCATTGGATTGGGTAGATGGATTGACTTTGACATTGAAGCCTTTGAAGAGGGTTCGGATGTTGAGTTTGACATACTGACCAATTTGATTAATGAATTGGTTTATGACTTGATGATTGTTTAA 2241 0.4087 MADSCPVDCINMPLKLEKSSSGAMKSKAQKVGNLPALRRFQNETLPPKSAKPIPVTHNKLLSPIKNPGYVQPRNVAQIMDAATKIIEASPLQYARNGMSSVGPSSVPLRILDLKEQLEGAHYESKLVNRHIANPVNGKPNEKSSLYKGTLTFKRLGDSEKNSSSYLGIKGKSASVAIPSKADVQSRDTSTLKGKKRHINLKEDNKTKPNQPSRSQKKQLTNPARPIPQRAFTGQKNNVLGQNNQKQNNITHKGKLTSKRESNKPTTQTCSSESSTSSRKSANKGAVNGNTEPNRSNTRVIDSRKESTVSKRRSISEKKKYISAVVHNDTRGTENVVDNYENKFIKCNITTDRSTDQNAVSMGESKDVISFTFTSPLGRTMPESQPSTAGTSNRVHANTHACYPKKLSSSTLVLDTDTIDGDTLSVLLEKMLQELPSRINSPQCTLISDESSSGSCNMQDNGCASSENRVLTMNQQLQTADPMEDPSCCSSESGNDIGSQHSRAVKLFENPAAVESYLDCEYSIFGSTLYPSIQDEEVSNFSSINDSASIQNGVAWSEQSSEVTEGSASIKQFSGISNGIDFRRSTRAMELGYIKDLLSAELLAEEFVIGETNKVIMPNLFDILEIQNAESYIEYSKLERKVLFDTVSDCLELRYRKAFVGSCKAWPELVASLEKRNLLAEELLKEIMSFRSMEEVVMVDEVVHKDMSIGLGRWIDFDIEAFEEGSDVEFDILTNLINELVYDLMIV 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30844g00004 746 MobiDBLite consensus disorder prediction 211 251 - -
Stsc30844g00004 746 MobiDBLite consensus disorder prediction 260 296 - -
Stsc30844g00004 746 MobiDBLite consensus disorder prediction 187 210 - -
Stsc30844g00004 746 MobiDBLite consensus disorder prediction 297 313 - -
Stsc30844g00004 746 MobiDBLite consensus disorder prediction 174 313 - -
Stsc30844g00004 746 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 17 742 - -
Stsc30844g00004 746 Pfam Domain of unknown function (DUF4378) 590 738 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30844g00004 Stsc-Chr30844 19019 22756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30844g00004 37 744 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.333 3.20e-70 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30844g00004 - - gmx:100797988 756.518