Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30840g00004 ATGCCTCCAGAGCAAGCAGTGGCGACATGCAGTCAGTCTAGAGGTTGTTTCAGGAATAGTGGCCGGCGGAGCTTCAGGCGAGATCTAAGCTCCTTGCATCTAGTGATGGAGGAGCGCGCTGCCATTGTTGTGTTGCTGCTGTGCTGTGTGAAGGAAAGCTCCCGAAAATGTCGTGCTTCAGTTCTAATCCAGGCGCCGCAACAGAATCCGGTCTTCCATTGCTCTCTGAGATGGCTTGCTTTTACTTTCCACAGGATTCCATTGCTGGTGCTGCTGAGAACTTGGTGGATTCTTCACCGATTCATTCTTTTGGGAAAATTGGCTAGGCTGAAACAGGCCAAAGATGAGACTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGGGTACGAGTTTCAAAAGAAAGTTTCGGAGAGTACCGGAGGTTCTGATGCTAATGTCAAGCGACTTGCAAGAAACTGA 462 0.4935 MPPEQAVATCSQSRGCFRNSGRRSFRRDLSSLHLVMEERAAIVVLLLCCVKESSRKCRASVLIQAPQQNPVFHCSLRWLAFTFHRIPLLVLLRTWWILHRFILLGKLARLKQAKDETEKEIAEHRAQLGYEFQKKVSESTGGSDANVKRLARN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30840g00004 153 Coils Coil 107 127 - -
Stsc30840g00004 153 Gene3D - 101 153 - -
Stsc30840g00004 153 Pfam Vacuolar (H+)-ATPase G subunit 106 151 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc30840g00004 153 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 106 152 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30840g00004 Stsc-Chr30840 17175 18726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30840g00004 105 150 Primary Pumps ATPases(2) AT4G23710 52.174 1.61e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30840g00004 K02152 - gmx:100305477 73.1738