Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30839g00002 ATGACTTCAACGGACATCAGAGACATTCTCACAGCTTTTAGTCCTTCTTTGGACTACTTCGCCATCACCACCGGCGATGGCCGCGTTAAGATATGGGATACATTGAAGGGTCAGGTACAGACTGAGTTTGCAGATATGTCATCAAATGACACAAGTATATATGATAGATCCACCAAGGGCCATCTCTCAATAGATTATACGTGCATGAAGTGGCTGTCGTTGGATAGAAAGAAAAAAAGGAAGCATGTATCCTCATTGTTAGTGCTTGGAACTGGTGGTGGTGATGTTTTAGCATTTGATGTGTCTGCTGGTCAAGTAGGTTGGAGAATTAGCAACTGTCATCCAGGAGGTGTGAGAGCCATTTCATCATCAGCAAATGGATCATGCATCTATACTGCAGGGGCAGATGGGATGGTATGCAGAATTGATTTCACGACAGGAAACCTGTTGGAAAAATTTAAAGCTTCTACAAAGGCTGTATCCTGTATGACTATTTCTTCAGATGGGAAGACTTTAGCTACTGCAGCATCACAGTTGAAGATCTTTAACAGTTCTAATCACAAAGAGATTCAAAAGTTCGCCGGTCATCCTGGATCTGTTCGGTGCTTGGTCTTCACTGAAGATGGCAAGTATATCCTTTCATCTGCCGTTGGTGAAAGATATGTTGCTCTATGGAGGATAGATGGCGCCCGAAAGCAGTCAGCTAGTTGTGTTCTTGCAATGGACCATCCTGCTGTCTTTCTTGATAGCAGGTGTGTTGATAGTGGGGAACATGATGAGAATGGCATGTGTGTTTTGGCCATCTCAGAAGTTGGTGTTTGTTATTTCTGGTTTGGAAATAGTATTGAAGAACTACGTAATTCAAAACCCACAAAAATATCTTTATCTTCAGAAGATATGTTCTCAAGAAAATACAAGGGTGCATTGCCAACAATATATGCTGCAAAGTTACTAGGCATTGAGAAGCCTTCTTCTGGGCATGTTTTTCTTGTTTCTGGGTTGCTTGTAAAGCCATCATTTCAAAAACTTTTAGTGCATTCTGGTACAGATGTAAAGTTGAATGTCTCCCATGATGGTATTCTTCTCCCAAAGAGTCAATCTCTTGTTAAATCTAAGAAGCGGTCGGATGAACGGAGAGTAACTGCGCTAGACCGCGCTAATGCAGAAGATGCCTTGCTTCCAATTCCTAAGGTGTTTAATTCTGAGAAAGAGAAAGCATTTCAAGACTCTTCAGACAAAACTGAAAAAGATGAAATGATCCAAGATGAGATCGATGCAATTTGTATGGAGGACCAGCTGAGAGAACTAGGGATACTTAAAAGCGAAAAAGAGTGTTTATCAAACCTTGAAAAATGTTATCCGTTATTGAAGGGTATTAATCTTGAAGCTGCTACTCCAATGAGAAAGATTAGAGCAACTGTTTTGTCGATGGAGCCAAGTGAAGCAATCAAGCTACTTGAATCGTTACTGGCTGCTTGGCAGTCAAGGTCATTTAGTGGAAAGTATGTTCTTCCCTGGATATATAGCACATTAGTAAATCATGGTCACAGTTTCACTACTGACGAATCTGCAACATGTATGCTTGATTCCTTGTACAAGATTACCAATTCTAGAGGGCCTACATTTCAGTCTTTATTACAATTATCAGGCCGTCTGCAACTAATGACATCCCAGATTGACAAGGCATCTCAGACCTCAAGTGATCCAGTACATGATCTCCAAAAGGATGAAAGTAGTGATGAGGATGAAGAAGATGAATATTTTCATGATGAAGGAGATGATGATTCTGAAATAAGCAGCGATGATGACAGCTAG 1815 0.4077 MTSTDIRDILTAFSPSLDYFAITTGDGRVKIWDTLKGQVQTEFADMSSNDTSIYDRSTKGHLSIDYTCMKWLSLDRKKKRKHVSSLLVLGTGGGDVLAFDVSAGQVGWRISNCHPGGVRAISSSANGSCIYTAGADGMVCRIDFTTGNLLEKFKASTKAVSCMTISSDGKTLATAASQLKIFNSSNHKEIQKFAGHPGSVRCLVFTEDGKYILSSAVGERYVALWRIDGARKQSASCVLAMDHPAVFLDSRCVDSGEHDENGMCVLAISEVGVCYFWFGNSIEELRNSKPTKISLSSEDMFSRKYKGALPTIYAAKLLGIEKPSSGHVFLVSGLLVKPSFQKLLVHSGTDVKLNVSHDGILLPKSQSLVKSKKRSDERRVTALDRANAEDALLPIPKVFNSEKEKAFQDSSDKTEKDEMIQDEIDAICMEDQLRELGILKSEKECLSNLEKCYPLLKGINLEAATPMRKIRATVLSMEPSEAIKLLESLLAAWQSRSFSGKYVLPWIYSTLVNHGHSFTTDESATCMLDSLYKITNSRGPTFQSLLQLSGRLQLMTSQIDKASQTSSDPVHDLQKDESSDEDEEDEYFHDEGDDDSEISSDDDS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30839g00002 604 Gene3D - 156 302 IPR015943 GO:0005515
Stsc30839g00002 604 MobiDBLite consensus disorder prediction 577 604 - -
Stsc30839g00002 604 PANTHER OS03G0300300 PROTEIN 3 603 - -
Stsc30839g00002 604 MobiDBLite consensus disorder prediction 559 604 - -
Stsc30839g00002 604 SMART WD40_4 186 226 IPR001680 GO:0005515
Stsc30839g00002 604 SMART WD40_4 2 33 IPR001680 GO:0005515
Stsc30839g00002 604 SMART WD40_4 103 143 IPR001680 GO:0005515
Stsc30839g00002 604 SMART WD40_4 146 183 IPR001680 GO:0005515
Stsc30839g00002 604 Pfam Dip2/Utp12 Family 464 556 IPR007148 -
Stsc30839g00002 604 Pfam WD domain, G-beta repeat 9 33 IPR001680 GO:0005515
Stsc30839g00002 604 Pfam WD domain, G-beta repeat 189 225 IPR001680 GO:0005515
Stsc30839g00002 604 Gene3D - 4 155 IPR015943 GO:0005515
Stsc30839g00002 604 ProSiteProfiles Trp-Asp (WD) repeats profile. 193 235 IPR001680 GO:0005515
Stsc30839g00002 604 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 239 IPR011047 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30839g00002 112 231 U-box Gene Family AT2G33340 29.839 1.03e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30839g00002 K14546 - gmx:100815458 831.247