Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30827g00008 | ATGGCTTTGAGTTTTGAATCATACAAATGGAAGTATGATGTGTTCTTGAGCTTCAGAGGGGTTGACACACGTAGGACTTTCACAAGCCATCTCTACCATGCTCTATTCCAAAAGGGAGTTAATAGCTTCATAGACTACAAGGAGCTTGAAAAGGGAGAGCAGATTTCGCCTTCAATTCTTAGAGCTATTGAAGGCTCTAGGATATCAGTTATTATATTCTCGGAAAACTATGCATCTTCTGTTTCTTGCTTGGATGAACTCGTTAAGATCCTCGAGTGCAAGGATTCCAAAGGGCAGCTAGTTTTGCCAGTCTTTTATAACGTGAATCCATTTCAACTAAGAGGACAACATGGAACTTTTGCAGAATATTTAGCAAAACATGAAGAGAAGTTCAGGGATGATGATATCAACAAAGTGAAAAGGTGGAGAGAAGCTCTATATCAAGCTTCTACTTTGTATGGGTGGCATCTAGGAGATGGGCAGGAATCTAAGTTTGTGCAGAGAATTGTTGAAGAGATAATGAATAAGCTGAATCTCATACCTTTCAATGTTGCTAAGCATCCTGTTGGGTTGGATTCACCAGCTGAAGATGTCAAATCACTCTTAGATCTTGGATCAGATGGCGTGCGGGCTGTAGGAATTTATGGCATTGGTGGAATAGGAAAAACAACACTTGTTAAGGCTGTTTACCATCATATTTCTCATCAGTTTGAGGGTAGTGCCTTCCTTGCAAATGTCAGAGAAATTTCAACCCAAAGCCATGGCTTAGTTCAACTACAAGAAGCACTTCTCTCGGAGATTTTGAGCCGTAGAGATTTAAAAGTAGGCAACAAAGATAGAGGGATTAATCTGATAAAGAACAGGCTTTATTGCAAAAAGGTTCTCATAGTTGTTGATGATTCTGATTCATTGGAGCAACTTGAATCATTG | 930 | 0.3957 | MALSFESYKWKYDVFLSFRGVDTRRTFTSHLYHALFQKGVNSFIDYKELEKGEQISPSILRAIEGSRISVIIFSENYASSVSCLDELVKILECKDSKGQLVLPVFYNVNPFQLRGQHGTFAEYLAKHEEKFRDDDINKVKRWREALYQASTLYGWHLGDGQESKFVQRIVEEIMNKLNLIPFNVAKHPVGLDSPAEDVKSLLDLGSDGVRAVGIYGIGGIGKTTLVKAVYHHISHQFEGSAFLANVREISTQSHGLVQLQEALLSEILSRRDLKVGNKDRGINLIKNRLYCKKVLIVVDDSDSLEQLESL | 310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30827g00008 | 310 | Gene3D | - | 175 | 310 | IPR027417 | - | |
Stsc30827g00008 | 310 | Pfam | NB-ARC domain | 198 | 300 | IPR002182 | GO:0043531 | |
Stsc30827g00008 | 310 | Gene3D | - | 8 | 174 | IPR035897 | - | |
Stsc30827g00008 | 310 | ProSiteProfiles | TIR domain profile. | 10 | 177 | IPR000157 | GO:0007165 | |
Stsc30827g00008 | 310 | PRINTS | Disease resistance protein signature | 288 | 302 | - | - | |
Stsc30827g00008 | 310 | PRINTS | Disease resistance protein signature | 211 | 226 | - | - | |
Stsc30827g00008 | 310 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 12 | 309 | IPR044974 | GO:0006952 | |
Stsc30827g00008 | 310 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 310 | IPR027417 | - | |
Stsc30827g00008 | 310 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 155 | IPR035897 | - | |
Stsc30827g00008 | 310 | SMART | till_3 | 11 | 152 | IPR000157 | GO:0007165 | |
Stsc30827g00008 | 310 | Pfam | TIR domain | 11 | 180 | IPR000157 | GO:0007165 | |
Stsc30827g00008 | 310 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 8 | 179 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30827g00008 | Stsc-Chr30827 | 32081 | 33449 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30827g00008 | 5 | 310 | WRKY Transcription Factor Family | AT4G12020 | 26.752 | 2.16e-28 | 113 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30827g00008 | - | - | ahf:112749316 | 548.895 |