Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30820g00005 ATGGATTCACTATCTCTAATCATCTCCTCTTATCCTCTCTTCAACAAAAACTACCCTAAAACCCAGAAATTCCCCACCTTCAAAGCCTCCTCTTTACTCTCAAACAATCACACACCACACTCTTCACCCCAATTCTCTGCATCTTCTCCTAAACCCTCCAAGAATATCCCATTTTCCGCACTCCAAACCCATTCACTTAACTCACTTCAAAATCTTTTCTTTCCCCAAAATCTCTTATCAAAATCTTTCTTTTCATTAACTGTGATTGACCTCTTTGCTTCTCTTCCATCCCTTGCTGATGAAGCTGCAGCATCATCCCCTTTAGTTGAGTCAGATGCAGGCAAAATCAATTTGGAAGCAATTCTGGTCTCCATTGATGATTTCTTCAACAGATACCCATTTTTTGTTGCTGGGGTTACCTTCATTTGGCTTGTTGTTTTACCTATTGCACAAGAGTATTTCAGGAAGTACAAGTTTGTGTCAGCCATTGATGCTTTCAGGAAACTCAGGGACGATCCTGATTCGCAGCTCTTGGATATAAGGGACAGGAAGAATGTGAAGTTTTTGCGGTCCCCAAACTTGAAATNNNNNNNNNNGTTGAAGAAGGAAGTGGTGCAGGTTGAGTTCACAGAGGGAAACGAAGATGGGTTTGTGAAGAAGGTTTTGGGAAGATTCAAGGACCCACCAAACACTGTTCTCTGTGTTTTGGACAGTTTTGACGGTAATTCATTGAAAGCTGCTGAGTTGCTATTCAAGAATGGCTTCAAAGAGGTCTATGCAATCAGAGGTGGAGTTAGAGGACAGCAAGGTTGGATGGCTATACAGGGTAGCCTTTTGCCGCCATCTGTCCACATTAAACGAAGGAAGAAGAAAACAGCTTCACAAGAAGTCAGTGCAAATGGAAATGGAACCATTCAGCAAAATGATAGTAATTATGAGAGCGCCTCAACCCCCGAAATTCCTTCAGTTGAAAATCAAGAAAAAGAGAATGGTCATGTGAAAAGGTCTGAAGAGTCTGTTCCAGAAGGGAAAATCAGTTCAGTAGCTTCTTCCTCTCCCTATCCCAATTACCCAGATTTGAAGCCACCATCCTCACCAACTCCTTCAAAGCCACAATAG 1119 0.4173 MDSLSLIISSYPLFNKNYPKTQKFPTFKASSLLSNNHTPHSSPQFSASSPKPSKNIPFSALQTHSLNSLQNLFFPQNLLSKSFFSLTVIDLFASLPSLADEAAASSPLVESDAGKINLEAILVSIDDFFNRYPFFVAGVTFIWLVVLPIAQEYFRKYKFVSAIDAFRKLRDDPDSQLLDIRDRKNVKFLRSPNLKXXXXLKKEVVQVEFTEGNEDGFVKKVLGRFKDPPNTVLCVLDSFDGNSLKAAELLFKNGFKEVYAIRGGVRGQQGWMAIQGSLLPPSVHIKRRKKKTASQEVSANGNGTIQQNDSNYESASTPEIPSVENQEKENGHVKRSEESVPEGKISSVASSSPYPNYPDLKPPSSPTPSKPQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30820g00005 372 MobiDBLite consensus disorder prediction 295 324 - -
Stsc30820g00005 372 MobiDBLite consensus disorder prediction 288 372 - -
Stsc30820g00005 372 Gene3D - 156 283 IPR036873 -
Stsc30820g00005 372 MobiDBLite consensus disorder prediction 325 341 - -
Stsc30820g00005 372 MobiDBLite consensus disorder prediction 31 54 - -
Stsc30820g00005 372 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 42 282 IPR044240 -
Stsc30820g00005 372 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 140 267 IPR036873 -
Stsc30820g00005 372 ProSiteProfiles Rhodanese domain profile. 171 280 IPR001763 -
Stsc30820g00005 372 MobiDBLite consensus disorder prediction 356 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30820g00005 Stsc-Chr30820 16201 19618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30820g00005 119 272 Sulfurtransferasese or Rhodanese AT4G01050 37.580 9.32e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30820g00005 - - gmx:100815667 435.261