Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30810g00005 ATGACAATTAGTAGGTTTCTATTATTGTTGTTTGTTACCTTGGGATTTCATCTGAGTAAGGCTCAAGATCAACCCCAACAAGGCCCCGACGATACTCAACCTGCGGCTACAGAGTGGGAAGGTATTCCCCTTGAAGCAGAGGATTGCAACGGGGTGTTTATCTCCTATGACCTTCTTGGTCGGCGGAAGGAGTTCCCTAAACTCAAGAACGCTACAGCGCAGTCGTGGGCCTTCAATGCCACCGCAAAGGTCCTCAACACGGGCACCCAAGTGGTTAAGGCTTGGAAGCTCTATGTTGGCTTCCAACACGACGAGATTCTCGTCTCTGCCTCCGGGGCCCACCTCTTCGAAGGGGAAGACTTCCCCGTTCACGTGGGAAAAAATGGCACCTACTTGGTAGGAGCTGCTCTCCCTGATCTCCAAACCGCCATCAACACTGCTCAAGATTTGAACCAAATTCAAGCTATACTTAATCTTGCTGGAACCCAGTTCGGTGTTAAGCCCCCTGCAGTTCCAATGCCTAAAACCATCAAATTGGTGATTGATGGATACGCATGCCCCCAACCAACTCTAAAACAGAGTTCAATGTATGCATGCTGCAAAAGAGACGCAAAATCGAAGGCTGGTGCGTCGAAGAAGAAATACCAAGCAAGACAGAAAGGGGATCTTTCCATAATGTACGACGTGTTGCAAGTGTATCCCAATAACTACTTTGCTCAAGTCACCATGGAGAACCGCAATCCACTAGGCCGCCTAGACCGTTGGAACCTCACATGGGAGTGGACCAGAGGCGAGTTCATATACTCCATCAAAGGCGCCTTCACTCGCCACGTGGACGCCTCTCCCTGCATCTTTGGCCCCGCCGGAGAATACTACAAAGATTTCGATTTCTCCAAAGTAATCAACTGCCAAAAGAATCCCGTCATCAGCGACTTGCCGCCTGACAAGGTCGATGACCCCGAAATCGGCAAGATCCCTTTCTGCTGCAGAAATGGCTCGCTCTTGTCCCCTCTCATGGACCCAAACCAAGCCAAGTCCGTATTCACCTTGCAGGTCTTCAAGATCCCACCCGATTCAAGCAGCAGAACTTCCATCTACCCTCCGCAGAGATGGCGAGTTTCGGGAATCCTGAACCCCGATTACAAATGCAACCCTCCCATGCAAGTGGAACCTTCTAGAAGCCCCGACGCGAGGGGGGTCGAGGCCAGCGTTATGGCCCTTGCCAGCTGGCAAATAGTGTGCAACATCACAAAGCCAACCAACAGACACACACGCTGCTGCGTCTCTTTCTCCGCATTCTACAACGAGTCCGCCGTTCCCTGCAACACATGCGCCTGCGGATGTCATCGGAGACCACCATCAGCCAAGAAGTGTAACCGTTTCGGAAGGGCGATGCTTCTCCCCTGGGATGCTCTTCTTGTGCCCTTTCGCAACAGGACGGTTAAGGCCCTTGCGTGGGCCAGGTTGAAGCATTTTCCTGTCCCAAACATGTTGCCTTGCCCGGACAACTGCGGCGTCAGCATCAACTGGCATGTTGCCTCCGACTTCAAGGGTGGCTGGACTGCCAGGATGACCATCTTCAACTGGGAGACCGTCAGCTTTCCGTACTGGTTCACGGTGTTGCAATTCAAGAACTCTTCTTTTGGTGTTGGTGTTGAGAATGTGTACTCGTTCAATGCTACCATCCTCCCTCGCCTGAACCACACCATCTTCATGCAAGGCATGCCGGGCTTGACCCATCTGGCTCCCCTCGAGAATCGTACAAATCTCAAGGTACCTGGCAAGCAGCAGTCTGTTCTTGCCTTTAACAAGAAGAGTGCGCCACAAATGCGAATCGCCAAAGGCGATGGTTTCCCTTCCAAACTTTATTTCAATGGAGAAGAGTGTTCCATCCCTACCCAATTTCCTCTTCACACTGCTAGTGCAAATCACCATACTCTTTTTGAACATCTACTGTACCACATCTTACTCGCCTTAGTTTTACATTTTACAATCAACAATAATCAAATATTGCAGTAA 2019 0.5067 MTISRFLLLLFVTLGFHLSKAQDQPQQGPDDTQPAATEWEGIPLEAEDCNGVFISYDLLGRRKEFPKLKNATAQSWAFNATAKVLNTGTQVVKAWKLYVGFQHDEILVSASGAHLFEGEDFPVHVGKNGTYLVGAALPDLQTAINTAQDLNQIQAILNLAGTQFGVKPPAVPMPKTIKLVIDGYACPQPTLKQSSMYACCKRDAKSKAGASKKKYQARQKGDLSIMYDVLQVYPNNYFAQVTMENRNPLGRLDRWNLTWEWTRGEFIYSIKGAFTRHVDASPCIFGPAGEYYKDFDFSKVINCQKNPVISDLPPDKVDDPEIGKIPFCCRNGSLLSPLMDPNQAKSVFTLQVFKIPPDSSSRTSIYPPQRWRVSGILNPDYKCNPPMQVEPSRSPDARGVEASVMALASWQIVCNITKPTNRHTRCCVSFSAFYNESAVPCNTCACGCHRRPPSAKKCNRFGRAMLLPWDALLVPFRNRTVKALAWARLKHFPVPNMLPCPDNCGVSINWHVASDFKGGWTARMTIFNWETVSFPYWFTVLQFKNSSFGVGVENVYSFNATILPRLNHTIFMQGMPGLTHLAPLENRTNLKVPGKQQSVLAFNKKSAPQMRIAKGDGFPSKLYFNGEECSIPTQFPLHTASANHHTLFEHLLYHILLALVLHFTINNNQILQ 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30810g00005 672 Pfam COBRA-like protein 237 417 IPR006918 GO:0010215|GO:0016020
Stsc30810g00005 672 PANTHER COBRA-LIKE PROTEIN 7 9 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30810g00005 Stsc-Chr30810 17667 19767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30810g00005 5 640 COBRA Gene Family AT3G20580 52.877 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30810g00005 - - gmx:100799716 870.152