Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30795g00002 ATGAAGCAGTTGATCCGGAGACTCTCGCGCGTCGCCGACTCTTCTCAGTACACGCTCCTCCGCTCCGACTCCGTTGCGGCTGCGGCAAGGCGTCACCGCCGCCGCTGCGGGGACTCCATCCGCCACAAGATTCGCCGCTCTACGGCGGTGCCGGAGGGACACGTTCCTGTGTACGTCGGCGACGAGATGGAGCGGTTTGCGGTGAGTGCGGAGCTTCTTAACCACCCGATCTTCGTGAAGCTTCTGAACGAGTCGGCTCAGGAGTACGGTTACGACCAGCAAGGTGTTATCCGGCTACCGTGCCACGTCATCGTATTCCAGCGCGTGCTTGAAGCACTCACTGTGGGACGCGACACGCGCCACCTCTTCGACCTCCTCAACTACTCCCCTGAAGAGTTGTTGACACACTAA 411 0.6083 MKQLIRRLSRVADSSQYTLLRSDSVAAAARRHRRRCGDSIRHKIRRSTAVPEGHVPVYVGDEMERFAVSAELLNHPIFVKLLNESAQEYGYDQQGVIRLPCHVIVFQRVLEALTVGRDTRHLFDLLNYSPEELLTH 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30795g00002 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 109 IPR003676 GO:0009733
Stsc30795g00002 136 Pfam Auxin responsive protein 8 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30795g00002 Stsc-Chr30795 3502 4136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30795g00002 47 136 Calmodulin-binding Proteins AT4G31320 33.333 1.09e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30795g00002 K14488 - gmx:100793103 186.422