Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30792g00001 ATGGCGTATAGACGATGCCTCTTGAAAAGAGGGAGCCTTGTAGATTGGAAGTGCCACCCGTCCTTCAGTTATGTAATCCACAACGATGATGGGAAACGCGAGCGCCCAGAAGAAAAATCATCCTCTGCAGGAATCAATAGTTTTGTCCAAACAAGGTCCTTTGGGAGCTCCTTTAATGGATCAATGGGGTTTGGTGCCTCTTCTAGAGTGCTTTCCAACACATTCCTTTCTCCGTGCTCTGGATATAATTTCTGCCGATACATGTCAACGGTTAACAATGGATCAGATAAGATTGAGATGATGACCGACATTGCAGATGTACTTAATGACAAAGTCATTGAAACCATAGCTTCTCAGGCTCCTGTTATTGACGAGGTTGCGATTGCTGCTGCCGATTCGTATTTACCTGTGAAGTTGCTGCAGTATGGGATCGATGCTGTGCATACGTATGCTGGGTTAAACTGGTGGGCAGCAATTGCTCTGACAACCCTTGTGATTCGAACAGCAACAGTTCCGCTCTTGGTCTACCAACTTAAGGCTACATCTAAGCTTACAATGTTGAGGCCGCACATGGAACGGATACGGGCTGAGATGGAATATAATGCTTTGGATCCCGTAGCTGCTGCTGAAAGGCAAAAGAAGATGGATCAGCTGTTTAAGGAATATGGTGTGTCGCCCTATACACCTTTGATGGGACTATTTATTCAAGGCCCTATCTTCATTAGCTTTTTTCTTGCGATATCAAACATGGCTGAAAAGGTGCCATCATTCAAGCATGGAGGAACATACTGGTTTACTGATCTCACAACTCCAGATGCTTTATACATTCTTCCTGTTTTGACTGCATTGTCGTTCTTAATAACAGTTGAGGCCATATTTTGTTACTGGGTTACGTCAAATTTGTTCTCACTTGTGTATGGACTTGCGCTTAAAGTTCCCGGCGTAAAGAAAACTTTGGGTATTCCTGAAATAGTTGCTGAAACACCTACCACACCTACCACTGCTCCAGAACCACAATCTCCGTTTAATGTATTTCCAGCACTTAAAAAATTCACATCGGAAGCAACTGAGCCAAGCACATCACCAGCTGAACCATCAAAACATTCAAACAAAAAGATTTCTTCTTCTGCTGTTCTCAGCCAAAGGCTCAAAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACCTCAAGAGATGA 1200 0.4308 MAYRRCLLKRGSLVDWKCHPSFSYVIHNDDGKRERPEEKSSSAGINSFVQTRSFGSSFNGSMGFGASSRVLSNTFLSPCSGYNFCRYMSTVNNGSDKIEMMTDIADVLNDKVIETIASQAPVIDEVAIAAADSYLPVKLLQYGIDAVHTYAGLNWWAAIALTTLVIRTATVPLLVYQLKATSKLTMLRPHMERIRAEMEYNALDPVAAAERQKKMDQLFKEYGVSPYTPLMGLFIQGPIFISFFLAISNMAEKVPSFKHGGTYWFTDLTTPDALYILPVLTALSFLITVEAIFCYWVTSNLFSLVYGLALKVPGVKKTLGIPEIVAETPTTPTTAPEPQSPFNVFPALKKFTSEATEPSTSPAEPSKHSNKKISSSAVLSQRLKSLEKQVKGRKKNLKR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30792g00001 399 MobiDBLite consensus disorder prediction 353 383 - -
Stsc30792g00001 399 PANTHER OXA1 291 384 IPR001708 GO:0016020|GO:0032977
Stsc30792g00001 399 Pfam 60Kd inner membrane protein 155 287 IPR028055 -
Stsc30792g00001 399 CDD 5TM_Oxa1-like 152 313 - -
Stsc30792g00001 399 MobiDBLite consensus disorder prediction 352 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30792g00001 Stsc-Chr30792 701 6698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30792g00001 135 290 Chloroplast and Mitochondria Gene Families AT2G28800 29.448 8.52e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30792g00001 K03217 - gmx:100792907 534.643