Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30781g00001 ATGGAGAAAGTGTTGAGGAAGAAAGGGATCAAAGGCTCTTCTTACAGGATCATTAATGGAGACCTATCAGTGATGAATAAACTTAACATGATCGCATCTTCAAAACCTATGGCTCTGAACCACCAAATCGCCACTCGAGTCATCCCTTTCTTTAACAACAGGATTCAGCAATATGGGAAGGTTTCACTGAGTTGGTTGGGAACAAGGCCAAGACTGATCATTACGGACAACGAACTTGTTCGATCCATTTTATTAAACAAGCATGGTCACCTTCGGAAGGCACCACGTAGCCCCCTTGTTATGCTCCTTGGCATTGGAATAACTTCCCTTGAAGGCGATGCTTGGAATCAGCGCAAAAAAGCCGTCCATCCTGCATTCCACCTTGACAAGTTGAAGGCATTGGTTCCGTCTACATTTGCGTATTGCTGCAATGCCTTGATAGATCGGTGGCTAAAGCTGGTTGAAGAGAAAGGATGTTGTGAAGTGGATGCAAATTTAGAATTTGATGTTCTCACGTCTGATGTTATTGCTCGAGCAGCCTTCGGAAGCAGCTACCAAGAGGGAAAGAAAATCTTCGAACTACAACACGAGATTAGATCGTTGGTCAATGAAGCCCTCAACTCCATTTATATCCCAGGTTTCAGATTTATACCAACTAAGAAGAACAAGAGAAGGTACAATATTGACAAGGAAATCAAATCTTTATTGATGGATATAATTGAGAAGAAGGAGCGTGGGATGAAAGAGGGAAAATTAGAAGGGCGTGATTTATTAAGCCTTCTATTGGAATTTAAACAACAGAATAACACTCTCACAAGTGAGGATTTAATCGAGGAGTGCAAGGTTTTCTACTTTGCTGGCCACTTCACCACATTCAACATGCTTGCGTGGACTATGTTATGTTTATCCATTCATCCAATTTGGCAAGAAAAGGCAAGAGACGAGGTGCTACACTTGTTTGGGAAAAAAACTCATCTTTCTTATGATGACATAAATCGCCTCAAGATTGTGCCAATGATATTCAAGGAAGTTTTGAGGCTGTATCCACCAGTACCAATTGTATTTAGATACACTACATGTGAAACAAAAATAGGGAACATGACTATTCCAGAAGGTGTTGAGCTTGTTCTACCATTTCTGCTTATTCAACATGATAACAAGTATTGGGACAAGGCAGACGAGTTCAATCCAGCTAGGTTTGCTGATGGGATTTCAAATGCTTCTAATGATGATCATGCTGCTTTCTATGGATTTGGATGGGGTCAAAGAAAATGTCTTGGACAAAACTTTGCATACTTGCAAGCAAAGATGGTTTTTTCTAAGATTCTTCAGAATTTCTCGTTCCAACTCTCACCCTCTTATGCCCATGCTCCAATTAATCAAGTTACTCTTCAGCCACAGTATGGAGCTCCGTTTATTATTCATCGTATTTAA 1434 0.4052 MEKVLRKKGIKGSSYRIINGDLSVMNKLNMIASSKPMALNHQIATRVIPFFNNRIQQYGKVSLSWLGTRPRLIITDNELVRSILLNKHGHLRKAPRSPLVMLLGIGITSLEGDAWNQRKKAVHPAFHLDKLKALVPSTFAYCCNALIDRWLKLVEEKGCCEVDANLEFDVLTSDVIARAAFGSSYQEGKKIFELQHEIRSLVNEALNSIYIPGFRFIPTKKNKRRYNIDKEIKSLLMDIIEKKERGMKEGKLEGRDLLSLLLEFKQQNNTLTSEDLIEECKVFYFAGHFTTFNMLAWTMLCLSIHPIWQEKARDEVLHLFGKKTHLSYDDINRLKIVPMIFKEVLRLYPPVPIVFRYTTCETKIGNMTIPEGVELVLPFLLIQHDNKYWDKADEFNPARFADGISNASNDDHAAFYGFGWGQRKCLGQNFAYLQAKMVFSKILQNFSFQLSPSYAHAPINQVTLQPQYGAPFIIHRI 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30781g00001 477 SUPERFAMILY Cytochrome P450 44 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 Gene3D Cytochrome P450 36 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 470 - -
Stsc30781g00001 477 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Stsc30781g00001 477 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30781g00001 477 Pfam Cytochrome P450 50 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30781g00001 Stsc-Chr30781 5358 12002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30781g00001 1 477 Cytochrome P450 AT3G14680 43.361 1.07e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30781g00001 - - aip:107623710 570.466