Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30775g00006 ATGTGCATCAGTTTAGGTAGGTTGCTTTGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTGTAACATCCTTGCTTTAATAGTTAGTGCCAGGCCCAAAAATCAGAATGGCTATGTTGTAAATTCAGAGTCAAACTCAAAGAAAGCATTTACCACAATTGAAGATGTTCTAACAGGATTGGTAAAATGGCTTTGTGAACAGTTGAAGAAACCTTCTCATCCTACACGGGGTGTTCCAACTGCCATCAATTGCCTGGCAACTCTACTTAAGGAACATGCAGTTAGGTCTTCCTTTGTTAAGGAAGATGGAATCAAGTTGCTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGTGTATGGTTCTTATCCTACTATGAACCGGCAATTGAATACTTGGCTACTTCAAGAACCCTTCCTTCTCTTGTTGATGTTGCCAAAAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTGTTGACCTTTAAGAACTTGCTATCAAAAGGGAAATTGGCTGCTCAAATGATTGACCTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCATTGAACTACCTGGAAGACAGGCTTAAGGATAACATTAAGGAATTAAGTTCTTTTGATGTCTATAAGCAAGAAGTGCTCCTAGGCAATCTGGTTTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGATAATATTGCCCATTTTGAAGAGAATGACTTCCAGATTATAAGGGTCCTAATAACAATTTTGGACACTGCTCGTGATCCAAGGACATTGGCTGTTGCTTGCTTTGACCTTTCGCAGTTCATCCAGCACCATCCTTCTGGGCGTCTCATTGTGGCAGACCTCAAGGCTAAGGAACAAGTAATGAAACTAATGAATCATGAGAATGCTGAAGTTACTAAGAATGCGCTGCTCTGCATCCAAAGACTTTTCTTAGGTGCAAAGTATGCCAGCTTCTTGCAGGCTTAG 1044 0.409 MCISLGRLLWKGNWFIQEKSCNILALIVSARPKNQNGYVVNSESNSKKAFTTIEDVLTGLVKWLCEQLKKPSHPTRGVPTAINCLATLLKEHAVRSSFVKEDGIKLLVPLISPASTQQSIQLLYETCLCVWFLSYYEPAIEYLATSRTLPSLVDVAKSSTKEKVVRVVVLTFKNLLSKGKLAAQMIDLQLPQVVQSLKAQAWSDEDLLEALNYLEDRLKDNIKELSSFDVYKQEVLLGNLVWSPMHKDPIFWRDNIAHFEENDFQIIRVLITILDTARDPRTLAVACFDLSQFIQHHPSGRLIVADLKAKEQVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30775g00006 347 Gene3D - 239 339 IPR038497 -
Stsc30775g00006 347 Pfam V-ATPase subunit H 224 336 IPR011987 GO:0000221|GO:1902600
Stsc30775g00006 347 SUPERFAMILY ARM repeat 7 337 IPR016024 -
Stsc30775g00006 347 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 7 346 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc30775g00006 347 Pfam V-ATPase subunit H 5 218 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc30775g00006 347 FunFam V-type proton ATPase subunit H 238 339 - -
Stsc30775g00006 347 Gene3D - 4 226 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30775g00006 Stsc-Chr30775 21073 25157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30775g00006 7 347 Primary Pumps ATPases(2) AT3G42050 74.487 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30775g00006 K02144 - gmx:100788723 584.334